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io mmdb
m
mmdb::NCSMatrix::m() mmdb::Mask::m() mmdb::math::GraphMatch::m() mmdb::SeqSuperpose::M()
MachEps mmdb
machine mmdb
MACHINE mmdb::machine
MACHINE_ALLIANT mmdb::machine
MACHINE_ALPHA mmdb::machine
MACHINE_ARDENT mmdb::machine
MACHINE_CONVEX mmdb::machine
MACHINE_ESV mmdb::machine
MACHINE_F2C_G77 mmdb::machine
MACHINE_HP9000 mmdb::machine
MACHINE_LINUX mmdb::machine
MACHINE_MVS mmdb::machine
MACHINE_RS6000 mmdb::machine
MACHINE_SGI mmdb::machine
MACHINE_SOLARIS mmdb::machine
MACHINE_SOLBOURNE mmdb::machine
MACHINE_STARDENT mmdb::machine
MACHINE_TITAN mmdb::machine
MACHINE_UNKNOWN mmdb::machine
MACHINE_VMS mmdb::machine
MachinEps mmdb
MAJOR_VERSION mmdb
Make_AN_ID_IZ mmdb_rwbrook.cpp
makeAAString mmdb
MakeAllSelIndexes mmdb::SelManager
MakeAtomCIF
mmdb::Residue::MakeAtomCIF() mmdb::Chain::MakeAtomCIF() mmdb::Model::MakeAtomCIF()
MakeBiomolecule mmdb::Manager
MakeBonds mmdb::BondManager
MakeBricks mmdb::CoorManager
MakeChannel mmdb_rwbrook.cpp
MakeCIF
mmdb::Atom::MakeCIF() mmdb::DBReference::MakeCIF() mmdb::SeqAdv::MakeCIF() mmdb::SeqRes::MakeCIF() mmdb::ModRes::MakeCIF() mmdb::HetRec::MakeCIF() mmdb::NCSMatrix::MakeCIF() mmdb::TVect::MakeCIF() mmdb::Cryst::MakeCIF() mmdb::Helix::MakeCIF() mmdb::Strand::MakeCIF() mmdb::Sheet::MakeCIF() mmdb::Sheets::MakeCIF() mmdb::Turn::MakeCIF() mmdb::HetCompounds::MakeCIF() mmdb::Link::MakeCIF() mmdb::LinkR::MakeCIF() mmdb::ObsLine::MakeCIF() mmdb::Caveat::MakeCIF() mmdb::KeyWords::MakeCIF() mmdb::RevData::MakeCIF() mmdb::Supersede::MakeCIF() mmdb::Remark::MakeCIF() mmdb::Title::MakeCIF() mmdb::ContainerClass::MakeCIF() mmdb::ContString::MakeCIF() mmdb::ClassContainer::MakeCIF()
MakeContacts mmdb::SeqSuperpose
MakeContainerClass
mmdb::ChainContainer::MakeContainerClass() mmdb::CrystContainer::MakeContainerClass() mmdb::SSContainer::MakeContainerClass() mmdb::LinkContainer::MakeContainerClass() mmdb::LinkRContainer::MakeContainerClass() mmdb::CisPepContainer::MakeContainerClass() mmdb::TitleContainer::MakeContainerClass() mmdb::ClassContainer::MakeContainerClass()
MakeFactoryFunctions
MakeFactoryFunctions(): mmdb_io_stream.h mmdb::MakeFactoryFunctions()
MakeGraph
mmdb::math::Graph::MakeGraph(PResidue R, cpstr altLoc=NULL) mmdb::math::Graph::MakeGraph(PPAtom atom, int nAtoms)
MakeHetAtoms mmdb::Root
MakeList mmdb
MakeMBricks mmdb::CoorManager
MakePDBAtomName mmdb::Atom
MakePDBHeaderString mmdb::Title
MakePSCIF mmdb::Model
MakeSelectionPath mmdb
MakeSelIndex
mmdb::SelManager::MakeSelIndex(int selHnd) mmdb::SelManager::MakeSelIndex(int selHnd, SELECTION_TYPE sType, int nsel)
MakeSign mmdb
MakeStreamFunctions
MakeStreamFunctions(): mmdb_io_stream.h mmdb::MakeStreamFunctions(ProModel) PContainerClass ChainContainer mmdb::MakeStreamFunctions(ChainContainer) ContainerChain mmdb::MakeStreamFunctions(ContainerChain) DBReference mmdb::MakeStreamFunctions(DBReference) SeqAdv mmdb::MakeStreamFunctions(SeqAdv) SeqRes mmdb::MakeStreamFunctions(SeqRes) ModRes mmdb::MakeStreamFunctions(ModRes) HetRec mmdb::MakeStreamFunctions(HetRec) Chain mmdb::MakeStreamFunctions(GenSym) void Contact mmdb::MakeStreamFunctions(CoorManager) mmdb::MakeStreamFunctions(CrystContainer) NCSMatrix mmdb::MakeStreamFunctions(NCSMatrix) TVect mmdb::MakeStreamFunctions(TVect) Cryst mmdb::MakeStreamFunctions(Cryst) void TestCryst() mmdb::math::MakeStreamFunctions(AlignParams) Alignment mmdb::math::MakeStreamFunctions(Vertex) Edge mmdb::math::MakeStreamFunctions(Edge) Graph mmdb::math::MakeStreamFunctions(Graph) GMatch mmdb::math::MakeStreamFunctions(GMatch) GraphMatch mmdb::mmcif::MakeStreamFunctions(Category) Struct mmdb::mmcif::MakeStreamFunctions(Struct) Loop mmdb::mmcif::MakeStreamFunctions(Loop) Data mmdb::mmcif::MakeStreamFunctions(Data) File mmdb::mmcif::MakeStreamFunctions(File) int isCIF(cpstr FName mmdb::MakeStreamFunctions(HetCompound) HetCompounds mmdb::MakeStreamFunctions(HetCompounds) PContainerClass SSContainer mmdb::MakeStreamFunctions(SSContainer) Helix mmdb::MakeStreamFunctions(Helix) Strand mmdb::MakeStreamFunctions(Strand) Sheet mmdb::MakeStreamFunctions(Sheet) Sheets mmdb::MakeStreamFunctions(Sheets) Turn mmdb::MakeStreamFunctions(Turn) PContainerClass LinkContainer mmdb::MakeStreamFunctions(LinkContainer) Link mmdb::MakeStreamFunctions(Link) PContainerClass LinkRContainer mmdb::MakeStreamFunctions(LinkRContainer) LinkR mmdb::MakeStreamFunctions(LinkR) PContainerClass CisPepContainer mmdb::MakeStreamFunctions(CisPepContainer) CisPep mmdb::MakeStreamFunctions(CisPep) Model mmdb::MakeStreamFunctions(Root) int isMMDBBIN(cpstr FName mmdb::MakeStreamFunctions(SymOp) SymOps mmdb::MakeStreamFunctions(TitleContainer) ObsLine mmdb::MakeStreamFunctions(ObsLine) TitleLine mmdb::MakeStreamFunctions(TitleLine) Caveat mmdb::MakeStreamFunctions(Caveat) Compound mmdb::MakeStreamFunctions(Compound) Source mmdb::MakeStreamFunctions(Source) KeyWords mmdb::MakeStreamFunctions(KeyWords) ExpData mmdb::MakeStreamFunctions(ExpData) MdlType mmdb::MakeStreamFunctions(MdlType) Author mmdb::MakeStreamFunctions(Author) RevData mmdb::MakeStreamFunctions(RevData) Supersede mmdb::MakeStreamFunctions(Supersede) Journal mmdb::MakeStreamFunctions(Journal) Remark mmdb::MakeStreamFunctions(Remark) void getRemarkKey(RPRemark rem mmdb::MakeStreamFunctions(UDRegister) UDData mmdb::MakeStreamFunctions(ContString) MakeStreamFunctions(ContainerClass) ClassContainer mmdb::MakeStreamFunctions(ClassContainer) AtomPath mmdb::MakeStreamFunctions(AtomPath) QuickSort mmdb::xml::MakeStreamFunctions()
makeString mmdb_ficif.cpp
makeStructAlignment mmdb::SeqSuperpose
MakeSymmetryRelief mmdb::math::Graph
MakeTer mmdb::Atom
MakeVertexIDs mmdb::math::Graph
Manager mmdb
Manager
mmdb::Chain::Manager() mmdb::Model::Manager() mmdb::Manager::Manager() mmdb::Manager::Manager(io::RPStream Object) mmdb::Model::manager()
markConnected mmdb::math::Graph
Mask mmdb
Mask
mmdb::Mask::Mask() mmdb::Mask::Mask(io::RPStream Object) mmdb::SelManager::mask()
MaskAtoms
mmdb::Residue::MaskAtoms() mmdb::Chain::MaskAtoms() mmdb::Model::MaskAtoms()
MaskChains mmdb::Model
MaskResidues
mmdb::Chain::MaskResidues() mmdb::Model::MaskResidues()
mat33 mmdb
Mat3Copy mmdb
Mat3Init mmdb
Mat3Inverse mmdb
mat44 mmdb
Mat4Copy mmdb
Mat4Div1 mmdb
Mat4Div2 mmdb
Mat4Init mmdb
Mat4Inverse mmdb
Mat4Mult mmdb
Mat4RotDet mmdb
mat633 mmdb
Match mmdb::math::GraphMatch
MatchCharge mmdb
MatchGraphs mmdb::math::GraphMatch
MatchName mmdb
MatchQuality mmdb::SeqSuperpose
MatchQuality2 mmdb::SeqSuperpose
math mmdb
maxContact mmdb::SeqSuperpose
MaxInt mmdb
MaxInt4 mmdb
MaxItn mmdb::math::BFGSMin
maxMatch mmdb::math::GraphMatch
maxMMDBName mmdb
maxNMatches mmdb::math::GraphMatch
MaxReal mmdb
MaxShortReal mmdb
MaxWord mmdb
MaxWord4 mmdb
MBrick mmdb
MBrick
mmdb::MBrick::MBrick() mmdb::CoorManager::mbrick()
mbrick_size mmdb::CoorManager
MContact mmdb
MContact mmdb::MContact
mConvolve mmdb::math
MdHess mmdb::math::BFGSMin
MdlType mmdb
mdlType
mmdb::Title::mdlType() mmdb::MdlType::MdlType() mmdb::MdlType::MdlType(cpstr S) mmdb::MdlType::MdlType(io::RPStream Object)
measure mmdb::CisPep
mem_read
mmdb::math::Vertex::mem_read() mmdb::math::Edge::mem_read() mmdb::math::Graph::mem_read() mmdb::math::GMatch::mem_read() mmdb::math::GraphMatch::mem_read() mmdb::mem_read(int &I, cpstr S, int &l) mmdb::mem_read(short &I, cpstr S, int &l) mmdb::mem_read(long &I, cpstr S, int &l) mmdb::mem_read(word &W, cpstr S, int &l) mmdb::mem_read(realtype &R, cpstr S, int &l) mmdb::mem_read(shortreal &R, cpstr S, int &l) mmdb::mem_read(pstr L, int len, cpstr S, int &l) mmdb::mem_read(pstr &L, cpstr S, int &l) mmdb::mem_read(bool &B, cpstr S, int &l)
mem_read_byte mmdb
mem_write
mmdb::math::Vertex::mem_write() mmdb::math::Edge::mem_write() mmdb::math::Graph::mem_write() mmdb::math::GMatch::mem_write() mmdb::math::GraphMatch::mem_write() mmdb::mem_write(int I, pstr S, int &l) mmdb::mem_write(short I, pstr S, int &l) mmdb::mem_write(long I, pstr S, int &l) mmdb::mem_write(word W, pstr S, int &l) mmdb::mem_write(realtype R, pstr S, int &l) mmdb::mem_write(shortreal R, pstr S, int &l) mmdb::mem_write(pstr L, int len, pstr S, int &l) mmdb::mem_write(pstr L, pstr S, int &l) mmdb::mem_write(bool B, pstr S, int &l)
mem_write_byte mmdb
method mmdb::math::AlignParams
MFunc mmdb::math::BFGSMin
MFuncData mmdb::math::BFGSMin
MICRO_VERSION mmdb
MinFunc mmdb::math::BFGSMin
MinFunc1 mmdb::math::BFGSMin
MinInt mmdb
MinInt4 mmdb
MINOR_VERSION mmdb
MinReal mmdb
MinShortReal mmdb
MKGRAPH_ChangedAltLoc mmdb::math
MKGRAPH_MaxOccupancy mmdb::math
MKGRAPH_NoAtoms mmdb::math
MKGRAPH_Ok mmdb::math
mlen mmdb::Mask
mlength mmdb::math::GMatch
mmcif mmdb
mmCIF2XML
mmdb::xml::mmCIF2XML(cpstr XMLName, mmcif::PFile mmCIFFile, int *rc) mmdb::xml::mmCIF2XML(mmcif::PData mmCIFData, int *rc=NULL)
MMCIF_Category mmdb::mmcif
MMCIF_Data mmdb::mmcif
MMCIF_ITEM mmdb::mmcif
MMCIF_Loop mmdb::mmcif
MMCIF_Struct mmdb::mmcif
mmCIFData mmdb_ficif.cpp
mmdb
mmdb_atom.cpp
mmdb_atom.h
mmdb_bondmngr.cpp
mmdb_bondmngr.h
MMDB_CCIF_Create
MMDB_CCIF_Create(pstr DataName): mmdb_ficif.cpp MMDB_CCIF_Create(pstr DataName): mmdb_ficif.cpp
MMDB_CCIF_Init
MMDB_CCIF_Init(): mmdb_ficif.cpp MMDB_CCIF_Init(): mmdb_ficif.cpp
MMDB_CCIF_PutDate
MMDB_CCIF_PutDate(pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutDate(pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_PutDot
MMDB_CCIF_PutDot(pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutDot(pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_PutInteger
MMDB_CCIF_PutInteger(int I, pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutInteger(int I, pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_PutLoopDot
MMDB_CCIF_PutLoopDot(pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp MMDB_CCIF_PutLoopDot(pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp
MMDB_CCIF_PutLoopInteger
MMDB_CCIF_PutLoopInteger(int I, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp MMDB_CCIF_PutLoopInteger(int I, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp
MMDB_CCIF_PutLoopQuestion
MMDB_CCIF_PutLoopQuestion(pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp MMDB_CCIF_PutLoopQuestion(pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp
MMDB_CCIF_PutLoopReal
MMDB_CCIF_PutLoopReal(realtype V, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp MMDB_CCIF_PutLoopReal(realtype V, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp
MMDB_CCIF_PutLoopString
MMDB_CCIF_PutLoopString(pstr Data, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp MMDB_CCIF_PutLoopString(pstr Data, pstr CatName, pstr Tag, int nrow): mmdb_ficif.cpp
MMDB_CCIF_PutQuestion
MMDB_CCIF_PutQuestion(pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutQuestion(pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_PutReal
MMDB_CCIF_PutReal(realtype V, pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutReal(realtype V, pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_PutString
MMDB_CCIF_PutString(pstr Data, pstr CatName, pstr Tag): mmdb_ficif.cpp MMDB_CCIF_PutString(pstr Data, pstr CatName, pstr Tag): mmdb_ficif.cpp
MMDB_CCIF_Quit
MMDB_CCIF_Quit(): mmdb_ficif.cpp MMDB_CCIF_Quit(): mmdb_ficif.cpp
MMDB_CCIF_Write
MMDB_CCIF_Write(pstr FileName): mmdb_ficif.cpp MMDB_CCIF_Write(pstr FileName): mmdb_ficif.cpp
mmdb_chain.cpp
mmdb_chain.h
mmdb_cifdefs.cpp
mmdb_cifdefs.h
mmdb_coormngr.cpp
mmdb_coormngr.h
mmdb_cryst.cpp
mmdb_cryst.h
MMDB_CRYST_FLAG mmdb
mmdb_defs.h
mmdb_ficif.cpp
mmdb_ficif.h
MMDB_FILE_Binary mmdb
MMDB_FILE_CIF mmdb
MMDB_FILE_PDB mmdb
MMDB_FILE_TYPE mmdb
MMDB_FILE_Undefined mmdb
mmdb_io_file.cpp
mmdb_io_file.h
mmdb_io_stream.cpp
mmdb_io_stream.h
mmdb_machine_.cpp
mmdb_machine_.h
mmdb_manager.cpp
mmdb_manager.h
mmdb_mask.cpp
mmdb_mask.h
mmdb_math_.cpp
mmdb_math_.h
mmdb_math_align.cpp
mmdb_math_align.h
mmdb_math_bfgsmin.cpp
mmdb_math_bfgsmin.h
mmdb_math_fft.cpp
mmdb_math_fft.h
mmdb_math_graph.cpp
mmdb_math_graph.h
mmdb_math_linalg.cpp
mmdb_math_linalg.h
mmdb_math_rand.cpp
mmdb_math_rand.h
mmdb_mattype.cpp
mmdb_mattype.h
mmdb_mmcif_.cpp
mmdb_mmcif_.h
mmdb_model.cpp
mmdb_model.h
MMDB_READ_FLAG mmdb
mmdb_root.cpp
mmdb_root.h
mmdb_rwbrook.cpp
mmdb_rwbrook.h
mmdb_selmngr.cpp
mmdb_selmngr.h
mmdb_seqsuperpose.cpp
mmdb_seqsuperpose.h
mmdb_symop.cpp
mmdb_symop.h
mmdb_tables.cpp
mmdb_tables.h
mmdb_title.cpp
mmdb_title.h
mmdb_uddata.cpp
mmdb_uddata.h
mmdb_utils.cpp
mmdb_utils.h
MMDB_VERSION mmdb
mmdb_xml_.cpp
mmdb_xml_.h
MMDBF_AllowDuplChainID mmdb
MMDBF_AutoSerials mmdb
MMDBF_DoNotProcessSpaceGroup mmdb
MMDBF_EnforceAtomNames mmdb
MMDBF_EnforceSpaces mmdb
MMDBF_EnforceUniqueChainID mmdb
MMDBF_FixSpaceGroup mmdb
MMDBF_IgnoreBlankLines mmdb
MMDBF_IgnoreCharge mmdb
MMDBF_IgnoreDuplSeqNum mmdb
MMDBF_IgnoreElement mmdb
MMDBF_IgnoreHash mmdb
MMDBF_IgnoreNonCoorPDBErrors mmdb
MMDBF_IgnoreRemarks mmdb
MMDBF_IgnoreSegID mmdb
MMDBF_IgnoreUnmatch mmdb
MMDBF_NoCoordRead mmdb
MMDBF_PrintCIFWarnings mmdb
MMDBF_SimRWBROOK mmdb
MMDBFCM_All mmdb
MMDBFCM_Buffer mmdb
MMDBFCM_ChainAnnot mmdb
MMDBFCM_CisPeps mmdb
MMDBFCM_Coord mmdb
MMDBFCM_Cryst mmdb
MMDBFCM_Flags mmdb
MMDBFCM_Footnotes mmdb
MMDBFCM_HetInfo mmdb
MMDBFCM_None mmdb
MMDBFCM_SA mmdb
MMDBFCM_SB mmdb
MMDBFCM_SC mmdb
MMDBFCM_SecStruct mmdb
MMDBFCM_Title mmdb
MMDBFCM_TitleKeepBM mmdb
MMDBFCM_Top mmdb
MMDBFLabel mmdb_root.cpp
mod mmdb
modDate mmdb::RevData
Model mmdb
model
mmdb::Chain::model() mmdb::Root::model() mmdb::Atom::Model() mmdb::SeqRes::Model() mmdb::Chain::Model() mmdb::Root::Model() mmdb::Title::Model() mmdb::Model::Model() mmdb::Model::Model(PManager MMDBF, int serialNum) mmdb::Model::Model(io::RPStream Object)
modelNo mmdb::AtomPath
ModF mmdb::math::BFGSMin
modId mmdb::RevData
modNum
mmdb::CisPep::modNum() mmdb::RevData::modNum()
ModRes mmdb
ModRes
mmdb::Chain::ModRes() mmdb::ModRes::ModRes() mmdb::ModRes::ModRes(PChain Chain_Owner) mmdb::ModRes::ModRes(PChain Chain_Owner, cpstr S) mmdb::ModRes::ModRes(io::RPStream Object) mmdb::Chain::modRes()
modType mmdb::RevData
MolecWeight mmdb
MoveByChainID mmdb::ChainContainer
MoveChain mmdb::Model
mround mmdb
MxStep mmdb::math::BFGSMin
xml mmdb
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