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G1 mmdb::math::GraphMatch
G2 mmdb::math::GraphMatch
gamma mmdb::Cryst
gammas mmdb::Cryst
gapWeight mmdb::math::AlignParams
gauss_rnd mmdb::math::RandomNumber
GenerateNCSMates mmdb::Root
GenerateSymMates mmdb::CoorManager
GenSym mmdb
GenSym
mmdb::GenSym::GenSym() mmdb::GenSym::GenSym(io::RPStream Object)
GenTransformation mmdb
GenTranslation mmdb
Get1LetterCode mmdb
Get1stChainID mmdb::ChainContainer
Get3LetterCode mmdb
GetAACharge mmdb
GetAAHydropathy
mmdb::Atom::GetAAHydropathy() mmdb::Residue::GetAAHydropathy() mmdb::GetAAHydropathy()
GetAAPIndex mmdb
GetAASimilarity
mmdb::Atom::GetAASimilarity(const ResName resName) mmdb::Atom::GetAASimilarity(PAtom A) mmdb::Residue::GetAASimilarity(const ResName resName) mmdb::Residue::GetAASimilarity(PResidue res) mmdb::GetAASimilarity()
GetAASolvationEnergy mmdb
GetAIndexRange mmdb::Model
GetAlignedS
mmdb::math::Alignment::GetAlignedS() mmdb::math::Alignment1::GetAlignedS()
GetAlignedT
mmdb::math::Alignment::GetAlignedT() mmdb::math::Alignment1::GetAlignedT()
GetAlignLength mmdb::math::Alignment1
GetAllAtoms
mmdb::ProModel::GetAllAtoms() mmdb::Model::GetAllAtoms()
GetAltLocations mmdb::Residue
GetAngle mmdb::math
GetAtom
mmdb::Residue::GetAtom(const AtomName aname, const Element elname=NULL, const AltLoc aloc=cpstr("")) mmdb::Residue::GetAtom(int atomNo) mmdb::Chain::GetAtom(int seqNo, const InsCode insCode, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Chain::GetAtom(int seqNo, const InsCode insCode, int atomNo) mmdb::Chain::GetAtom(int resNo, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Chain::GetAtom(int resNo, int atomNo) mmdb::CoorManager::GetAtom(int modelNo, const ChainID chID, int seqNo, const InsCode insCode, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::CoorManager::GetAtom(int modelNo, const ChainID chID, int seqNo, const InsCode insCode, int atomNo) mmdb::CoorManager::GetAtom(int modelNo, const ChainID chID, int resNo, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::CoorManager::GetAtom(int modelNo, const ChainID chID, int resNo, int atomNo) mmdb::CoorManager::GetAtom(int modelNo, int chNo, int seqNo, const InsCode insCode, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::CoorManager::GetAtom(int modelNo, int chNo, int seqNo, const InsCode insCode, int atomNo) mmdb::CoorManager::GetAtom(int modelNo, int chNo, int resNo, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::CoorManager::GetAtom(int modelNo, int chNo, int resNo, int atomNo) mmdb::CoorManager::GetAtom(cpstr CID) mmdb::Model::GetAtom(const ChainID chID, int seqNo, const InsCode insCode, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Model::GetAtom(const ChainID chID, int seqNo, const InsCode insCode, int atomNo) mmdb::Model::GetAtom(const ChainID chID, int resNo, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Model::GetAtom(const ChainID chID, int resNo, int atomNo) mmdb::Model::GetAtom(int chNo, int seqNo, const InsCode insCode, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Model::GetAtom(int chNo, int seqNo, const InsCode insCode, int atomNo) mmdb::Model::GetAtom(int chNo, int resNo, const AtomName aname, const Element elmnt, const AltLoc aloc) mmdb::Model::GetAtom(int chNo, int resNo, int atomNo)
GetAtomArray mmdb::Root
GetAtomArrayLength mmdb::Root
GetAtomCharge mmdb::Atom
GetAtomI mmdb::Root
GetAtomID mmdb::Atom
GetAtomIDfmt mmdb::Atom
GetAtomName mmdb::Atom
GetAtomStatistics
mmdb::Residue::GetAtomStatistics() mmdb::Chain::GetAtomStatistics() mmdb::Model::GetAtomStatistics() mmdb::Root::GetAtomStatistics() mmdb::SelManager::GetAtomStatistics()
GetAtomTable
mmdb::Residue::GetAtomTable() mmdb::Chain::GetAtomTable(int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Chain::GetAtomTable(int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(int modelNo, const ChainID chainID, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(int modelNo, int chainNo, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(int modelNo, const ChainID chainID, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(int modelNo, int chainNo, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable(cpstr CID, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable(const ChainID chainID, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable(int chainNo, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable(const ChainID chainID, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable(int chainNo, int resNo, PPAtom &atomTable, int &NumberOfAtoms)
GetAtomTable1
mmdb::Residue::GetAtomTable1() mmdb::Chain::GetAtomTable1(int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Chain::GetAtomTable1(int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(int modelNo, const ChainID chainID, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(int modelNo, int chainNo, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(int modelNo, const ChainID chainID, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(int modelNo, int chainNo, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::CoorManager::GetAtomTable1(cpstr CID, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable1(const ChainID chainID, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable1(int chainNo, int seqNo, const InsCode insCode, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable1(const ChainID chainID, int resNo, PPAtom &atomTable, int &NumberOfAtoms) mmdb::Model::GetAtomTable1(int chainNo, int resNo, PPAtom &atomTable, int &NumberOfAtoms)
GetBiomolecule
mmdb::Manager::GetBiomolecule() mmdb::Title::GetBiomolecule()
GetBiomolecules
mmdb::Manager::GetBiomolecules() mmdb::Title::GetBiomolecules()
GetBondedVertexID mmdb::math::Graph
GetBonds
mmdb::Atom::GetBonds(RPAtomBond atomBond, int &nAtomBonds) mmdb::Atom::GetBonds(RPAtomBondI atomBondI, int &nAtomBonds) mmdb::Atom::GetBonds(PAtomBondI atomBondI, int &nAtomBonds, int maxlength)
GetBrick mmdb::CoorManager
GetBrickCoor
mmdb::CoorManager::GetBrickCoor(PAtom A, int &nx, int &ny, int &nz) mmdb::CoorManager::GetBrickCoor(realtype x, realtype y, realtype z, int &nx, int &ny, int &nz)
GetBrickDimension mmdb::CoorManager
GetCategory mmdb::mmcif::Data
GetCategoryID
mmdb::mmcif::Category::GetCategoryID() mmdb::mmcif::Struct::GetCategoryID() mmdb::mmcif::Loop::GetCategoryID()
GetCategoryName mmdb::mmcif::Category
GetCategoryNo mmdb::mmcif::Data
GetCaveat mmdb::Title
getCCIFTag mmdb::xml
GetCell
mmdb::Cryst::GetCell() mmdb::Root::GetCell()
GetCenter mmdb::Residue
GetChain
mmdb::Atom::GetChain() mmdb::Residue::GetChain() mmdb::CoorManager::GetChain(int modelNo, const ChainID chainID) mmdb::CoorManager::GetChain(int modelNo, int chainNo) mmdb::CoorManager::GetChain(cpstr CID) mmdb::Model::GetChain(const ChainID chID) mmdb::Model::GetChain(int chainNo)
GetChainCalphas mmdb::Atom
GetChainCreate mmdb::Model
GetChainID
mmdb::Atom::GetChainID() mmdb::Residue::GetChainID() mmdb::Chain::GetChainID() mmdb::Chain::GetChainID(pstr ChID)
GetChainTable
mmdb::CoorManager::GetChainTable(int modelNo, PPChain &chainTable, int &NumberOfChains) mmdb::CoorManager::GetChainTable(cpstr CID, PPChain &chainTable, int &NumberOfChains) mmdb::Model::GetChainTable()
GetChannel mmdb_rwbrook.cpp
GetCIF
mmdb::Atom::GetCIF() mmdb::DBReference::GetCIF() mmdb::SeqAdv::GetCIF() mmdb::SeqRes::GetCIF() mmdb::ModRes::GetCIF() mmdb::HetRec::GetCIF() mmdb::NCSMatrix::GetCIF() mmdb::TVect::GetCIF() mmdb::Cryst::GetCIF() mmdb::Helix::GetCIF() mmdb::Strand::GetCIF() mmdb::Sheet::GetCIF() mmdb::Sheets::GetCIF() mmdb::Turn::GetCIF() mmdb::HetCompounds::GetCIF() mmdb::Link::GetCIF() mmdb::LinkR::GetCIF() mmdb::Model::GetCIF() mmdb::ObsLine::GetCIF() mmdb::KeyWords::GetCIF() mmdb::RevData::GetCIF() mmdb::Supersede::GetCIF() mmdb::Remark::GetCIF() mmdb::Title::GetCIF() mmdb::ContainerClass::GetCIF() mmdb::ClassContainer::GetCIF()
GetCIFData
mmdb::mmcif::File::GetCIFData(int dataNo) mmdb::mmcif::File::GetCIFData(cpstr DName)
GetCIFDataNo mmdb::mmcif::File
GetCIFMessage mmdb::mmcif
GetCIFPSClass mmdb::Model
GetCisPep mmdb::Model
GetCisPeps mmdb::Model
GetClassID
mmdb::DBReference::GetClassID() mmdb::SeqAdv::GetClassID() mmdb::ModRes::GetClassID() mmdb::HetRec::GetClassID() mmdb::NCSMatrix::GetClassID() mmdb::TVect::GetClassID() mmdb::Helix::GetClassID() mmdb::Turn::GetClassID() mmdb::Link::GetClassID() mmdb::LinkR::GetClassID() mmdb::CisPep::GetClassID() mmdb::ObsLine::GetClassID() mmdb::TitleLine::GetClassID() mmdb::Caveat::GetClassID() mmdb::Compound::GetClassID() mmdb::Source::GetClassID() mmdb::ExpData::GetClassID() mmdb::MdlType::GetClassID() mmdb::Author::GetClassID() mmdb::RevData::GetClassID() mmdb::Supersede::GetClassID() mmdb::Journal::GetClassID() mmdb::Remark::GetClassID() mmdb::ContainerClass::GetClassID() mmdb::ContString::GetClassID()
GetCol73 mmdb::Title
GetCompound mmdb::Title
GetContainerClass mmdb::ClassContainer
GetCoordHierarchy
mmdb::Atom::GetCoordHierarchy() mmdb::Residue::GetCoordHierarchy() mmdb::ProModel::GetCoordHierarchy() mmdb::Chain::GetCoordHierarchy() mmdb::Model::GetCoordHierarchy()
GetCosine mmdb::Atom
getCovalentRadius mmdb
GetCrystData mmdb::Root
GetData
mmdb::Atom::GetData() mmdb::xml::XMLObject::GetData(cpstr Tag=NULL, int objNo=1) mmdb::xml::XMLObject::GetData(pstr &Data, cpstr Tag=NULL, int objNo=1) mmdb::xml::XMLObject::GetData(realtype &V, cpstr Tag=NULL, int objNo=1) mmdb::xml::XMLObject::GetData(int &iV, cpstr Tag=NULL, int objNo=1) mmdb::xml::XMLObject::GetData(bool &bV, cpstr Tag=NULL, int objNo=1)
GetDataItem mmdb::mmcif::Data
GetDataName
mmdb::mmcif::Data::GetDataName(pstr &dname, bool Remove=false) mmdb::mmcif::Data::GetDataName()
GetDBRef mmdb::Chain
GetDist2
mmdb::Atom::GetDist2(PAtom a) mmdb::Atom::GetDist2(PAtom a, mat44 &tm) mmdb::Atom::GetDist2(PAtom a, mat33 &r, vect3 &t) mmdb::Atom::GetDist2(realtype ax, realtype ay, realtype az)
GetEdge mmdb::math::Graph
GetEdges mmdb::math::Graph
GetElementName mmdb::Atom
getElementNo mmdb
GetEntryID
mmdb::ProModel::GetEntryID() mmdb::Chain::GetEntryID() mmdb::Model::GetEntryID() mmdb::Root::GetEntryID()
GetErrorDescription mmdb
GetEulerRotMatrix mmdb
GetEulerTMatrix mmdb
GetExpData mmdb::Title
GetExpDataRec mmdb::Root
GetFExt mmdb::io
GetField
mmdb::mmcif::Struct::GetField() mmdb::mmcif::Loop::GetField() mmdb::mmcif::Data::GetField()
GetFilePool mmdb::io::File
GetFileType mmdb::Root
GetFirstDefinedModel mmdb::CoorManager
GetFirstModelNum mmdb::CoorManager
GetFirstObject mmdb::xml::XMLObject
GetFName mmdb::io
GetFPath mmdb::io
GetFractMatrix
mmdb::Cryst::GetFractMatrix() mmdb::Root::GetFractMatrix()
GetHandle mmdb::io::File
GetHelices mmdb::Model
GetHelix mmdb::Model
GetHetInfo mmdb::Model
GetID mmdb::math::Vertex
GetIDCode mmdb::Title
GetIndex mmdb::Atom
GetInputBuffer mmdb::Root
GetInsCode
mmdb::Atom::GetInsCode() mmdb::Residue::GetInsCode()
GetInteger
mmdb::mmcif::Struct::GetInteger() mmdb::mmcif::Loop::GetInteger() mmdb::mmcif::Data::GetInteger() mmdb::GetInteger()
GetIntIns mmdb
GetIVector mmdb::mmcif::Loop
GetJournal
mmdb::Manager::GetJournal() mmdb::Title::GetJournal()
GetKeyWords mmdb::Title
GetLabelAsymID
mmdb::Atom::GetLabelAsymID() mmdb::Residue::GetLabelAsymID()
GetLabelCompID
mmdb::Atom::GetLabelCompID() mmdb::Residue::GetLabelCompID()
GetLabelEntityID
mmdb::Atom::GetLabelEntityID() mmdb::Residue::GetLabelEntityID()
GetLabelSeqID
mmdb::Atom::GetLabelSeqID() mmdb::Residue::GetLabelSeqID()
GetLastObject mmdb::xml::XMLObject
getLength mmdb::Mask
GetLinkR mmdb::Model
GetLinkRs mmdb::Model
GetLoop
mmdb::mmcif::Data::GetLoop(cpstr CName) mmdb::mmcif::Data::GetLoop(io::RFile f, pstr S, pstr &L, pstr &p, int &lcount, int &llen)
GetLoopInteger mmdb::mmcif::Data
GetLoopIVector mmdb::mmcif::Data
GetLoopLength
mmdb::mmcif::Loop::GetLoopLength() mmdb::mmcif::Data::GetLoopLength()
GetLoopReal mmdb::mmcif::Data
GetLoopRVector mmdb::mmcif::Data
GetLoopString
mmdb::mmcif::Data::GetLoopString(pstr &Dest, cpstr CName, cpstr TName, int nrow, bool Remove=false) mmdb::mmcif::Data::GetLoopString(cpstr CName, cpstr TName, int nrow, int &RC)
GetLoopSVector mmdb::mmcif::Data
GetMachineID mmdb::machine
GetMachineName
mmdb::machine::GetMachineName(int MachineID) mmdb::machine::GetMachineName()
GetMassCenter mmdb
GetMatch
mmdb::math::GMatch::GetMatch() mmdb::math::GraphMatch::GetMatch()
GetMatrix3Memory
mmdb::GetMatrix3Memory(rmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(imatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(wmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(bmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(omatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(lmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(lwmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK) mmdb::GetMatrix3Memory(psmatrix3 &A, word N, word M, word K, word ShiftN, word ShiftM, word ShiftK)
GetMatrixMemory
mmdb::GetMatrixMemory(rmatrix &A, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(imatrix &A, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(wmatrix &W, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(bmatrix &B, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(omatrix &O, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(lmatrix &L, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(lwmatrix &L, word N, word M, word ShiftN, word ShiftM) mmdb::GetMatrixMemory(psmatrix &P, word N, word M, word ShiftN, word ShiftM)
GetMaxMatchSize mmdb::math::GraphMatch
GetMaxSize mmdb::AtomStat
GetMBrick mmdb::CoorManager
GetMBrickCoor
mmdb::CoorManager::GetMBrickCoor(PAtom A, int &nx, int &ny, int &nz) mmdb::CoorManager::GetMBrickCoor(realtype x, realtype y, realtype z, int &nx, int &ny, int &nz)
GetMBrickDimension mmdb::CoorManager
GetMdlType mmdb::Title
GetMdlTypeRec mmdb::Root
GetMemory
mmdb::math::BFGSMin::GetMemory() mmdb::math::GraphMatch::GetMemory()
GetMMCIFInputBuffer mmdb::mmcif
GetModel
mmdb::Atom::GetModel() mmdb::Residue::GetModel() mmdb::Chain::GetModel() mmdb::CoorManager::GetModel(int modelNo) mmdb::CoorManager::GetModel(cpstr CID)
GetModelID mmdb::Model
GetModelNum
mmdb::Atom::GetModelNum() mmdb::Residue::GetModelNum() mmdb::Chain::GetModelNum()
GetModelTable mmdb::CoorManager
GetModResidue mmdb::Chain
getMolecWeight mmdb
GetName
mmdb::math::Vertex::GetName() mmdb::math::Graph::GetName()
GetNBondedVertices mmdb::math::Graph
GetNBonds
mmdb::Atom::GetNBonds() mmdb::math::Vertex::GetNBonds()
GetNCSMatrix
mmdb::Cryst::GetNCSMatrix(int NCSMatrixNo, mat33 &ncs_m, vect3 &ncs_v) mmdb::Cryst::GetNCSMatrix(int NCSMatrixNo, mat44 &ncs_m, int &iGiven) mmdb::Root::GetNCSMatrix()
GetNewChainID
mmdb::Model::GetNewChainID() mmdb::Root::GetNewChainID()
GetNofAltLocations mmdb::Residue
GetNofBiomolecules
mmdb::Manager::GetNofBiomolecules() mmdb::Title::GetNofBiomolecules()
GetNofData mmdb::mmcif::File
GetNofEdges mmdb::math::Graph
GetNofExpDataRecs mmdb::Root
getNofIUData mmdb::UDData
GetNofMatches mmdb::math::GraphMatch
GetNofMdlTypeRecs mmdb::Root
GetNofModResidues mmdb::Chain
getNofRUData mmdb::UDData
getNofSUData mmdb::UDData
GetNofSymOps mmdb::SymOps
GetNofTags mmdb::mmcif::Category
GetNofVertices mmdb::math::Graph
GetNumber mmdb::io::File
GetNumberOfAllAtoms
mmdb::ProModel::GetNumberOfAllAtoms() mmdb::Model::GetNumberOfAllAtoms()
GetNumberOfAtoms
mmdb::Residue::GetNumberOfAtoms() mmdb::Residue::GetNumberOfAtoms(bool countTers) mmdb::Chain::GetNumberOfAtoms(bool countTers) mmdb::Chain::GetNumberOfAtoms(int seqNo, const InsCode insCode) mmdb::Chain::GetNumberOfAtoms(int resNo) mmdb::CoorManager::GetNumberOfAtoms() mmdb::CoorManager::GetNumberOfAtoms(int modelNo, const ChainID chainID, int seqNo, const InsCode insCode) mmdb::CoorManager::GetNumberOfAtoms(int modelNo, int chainNo, int seqNo, const InsCode insCode) mmdb::CoorManager::GetNumberOfAtoms(int modelNo, const ChainID chainID, int resNo) mmdb::CoorManager::GetNumberOfAtoms(int modelNo, int chainNo, int resNo) mmdb::CoorManager::GetNumberOfAtoms(cpstr CID) mmdb::Model::GetNumberOfAtoms(bool countTers) mmdb::Model::GetNumberOfAtoms(const ChainID chainID, int seqNo, const InsCode insCode) mmdb::Model::GetNumberOfAtoms(int chainNo, int seqNo, const InsCode insCode) mmdb::Model::GetNumberOfAtoms(const ChainID chainID, int resNo) mmdb::Model::GetNumberOfAtoms(int chainNo, int resNo)
GetNumberOfCategories mmdb::mmcif::Data
GetNumberOfChains
mmdb::CoorManager::GetNumberOfChains(int modelNo) mmdb::CoorManager::GetNumberOfChains(cpstr CID) mmdb::Model::GetNumberOfChains()
GetNumberOfCisPeps mmdb::Model
GetNumberOfDBRefs mmdb::Chain
GetNumberOfHelices mmdb::Model
GetNumberOfLinkRs mmdb::Model
GetNumberOfModels
mmdb::ProModel::GetNumberOfModels() mmdb::CoorManager::GetNumberOfModels() mmdb::Model::GetNumberOfModels()
GetNumberOfNCSMates
mmdb::Cryst::GetNumberOfNCSMates() mmdb::Root::GetNumberOfNCSMates()
GetNumberOfNCSMatrices
mmdb::Cryst::GetNumberOfNCSMatrices() mmdb::Root::GetNumberOfNCSMatrices()
GetNumberOfObjects mmdb::xml::XMLObject
GetNumberOfResidues
mmdb::Chain::GetNumberOfResidues() mmdb::CoorManager::GetNumberOfResidues(int modelNo, const ChainID chainID) mmdb::CoorManager::GetNumberOfResidues(int modelNo, int chainNo) mmdb::CoorManager::GetNumberOfResidues(cpstr CID) mmdb::Model::GetNumberOfResidues() mmdb::Model::GetNumberOfResidues(const ChainID chainID) mmdb::Model::GetNumberOfResidues(int chainNo)
GetNumberOfSheets mmdb::Model
GetNumberOfStrands
mmdb::Model::GetNumberOfStrands(int sheetSerNum) mmdb::Model::GetNumberOfStrands(const SheetID sheetID)
GetNumberOfSymOps
mmdb::Cryst::GetNumberOfSymOps() mmdb::Root::GetNumberOfSymOps()
GetObject
mmdb::xml::XMLObject::GetObject(cpstr Tag, int objNo=1) mmdb::xml::XMLObject::GetObject(int objectNo)
GetObsData mmdb::Title
GetOccupancy mmdb::Atom
GetOperation mmdb::SymOp
getOrthCodeName mmdb
GetParent mmdb::xml::XMLObject
getPhi mmdb
GetProperty
mmdb::math::Vertex::GetProperty() mmdb::math::Edge::GetProperty()
getPsi mmdb
GetRCell
mmdb::Cryst::GetRCell() mmdb::Root::GetRCell()
GetReal
mmdb::mmcif::Struct::GetReal() mmdb::mmcif::Loop::GetReal() mmdb::mmcif::Data::GetReal() mmdb::GetReal()
GetRecHeap mmdb::math::GraphMatch
GetRemarks
mmdb::Manager::GetRemarks() mmdb::Title::GetRemarks()
GetResidue
mmdb::Atom::GetResidue() mmdb::Chain::GetResidue(int resNo) mmdb::Chain::GetResidue(int seqNum, const InsCode insCode) mmdb::CoorManager::GetResidue(int modelNo, const ChainID chainID, int seqNo, const InsCode insCode) mmdb::CoorManager::GetResidue(int modelNo, int chainNo, int seqNo, const InsCode insCode) mmdb::CoorManager::GetResidue(int modelNo, const ChainID chainID, int resNo) mmdb::CoorManager::GetResidue(int modelNo, int chainNo, int resNo) mmdb::CoorManager::GetResidue(cpstr CID) mmdb::Model::GetResidue(const ChainID chainID, int seqNo, const InsCode insCode) mmdb::Model::GetResidue(const ChainID chainID, int resNo) mmdb::Model::GetResidue(int chainNo, int seqNo, const InsCode insCode) mmdb::Model::GetResidue(int chainNo, int resNo)
GetResidueCreate mmdb::Chain
GetResidueID mmdb::Residue
GetResidueNo
mmdb::Atom::GetResidueNo() mmdb::Residue::GetResidueNo() mmdb::Chain::GetResidueNo() mmdb::CoorManager::GetResidueNo(int modelNo, const ChainID chainID, int seqNo, const InsCode insCode) mmdb::CoorManager::GetResidueNo(int modelNo, int chainNo, int seqNo, const InsCode insCode) mmdb::Model::GetResidueNo(const ChainID chainID, int seqNo, const InsCode insCode) mmdb::Model::GetResidueNo(int chainNo, int seqNo, const InsCode insCode) mmdb::getResidueNo()
GetResidueTable
mmdb::Chain::GetResidueTable() mmdb::CoorManager::GetResidueTable(PPResidue &resTable, int &NumberOfResidues) mmdb::CoorManager::GetResidueTable(int modelNo, const ChainID chainID, PPResidue &resTable, int &NumberOfResidues) mmdb::CoorManager::GetResidueTable(int modelNo, int chainNo, PPResidue &resTable, int &NumberOfResidues) mmdb::CoorManager::GetResidueTable(cpstr CID, PPResidue &resTable, int &NumberOfResidues) mmdb::Model::GetResidueTable(PPResidue &resTable, int &NumberOfResidues) mmdb::Model::GetResidueTable(const ChainID chainID, PPResidue &resTable, int &NumberOfResidues) mmdb::Model::GetResidueTable(int chainNo, PPResidue &resTable, int &NumberOfResidues)
GetResName
mmdb::Atom::GetResName() mmdb::Residue::GetResName()
GetResolution
mmdb::Manager::GetResolution() mmdb::Title::GetResolution()
GetROMatrix mmdb::Root
GetRotParameters mmdb
GetRVector mmdb::mmcif::Loop
GetScore
mmdb::math::Alignment::GetScore() mmdb::math::Alignment1::GetScore()
GetSelIndex
mmdb::SelManager::GetSelIndex(int selHnd, PPAtom &SelAtom, int &nSelAtoms) mmdb::SelManager::GetSelIndex(int selHnd, PPResidue &SelResidues, int &nSelResidues) mmdb::SelManager::GetSelIndex(int selHnd, PPChain &SelChains, int &nSelChains) mmdb::SelManager::GetSelIndex(int selHnd, PPModel &SelModels, int &nSelModels)
GetSelLength mmdb::SelManager
GetSelMask
mmdb::Root::GetSelMask() mmdb::SelManager::GetSelMask()
GetSelType mmdb::SelManager
GetSeqId mmdb::math::Alignment
GetSeqNum
mmdb::Atom::GetSeqNum() mmdb::Residue::GetSeqNum()
GetSerNum
mmdb::ProModel::GetSerNum() mmdb::Model::GetSerNum()
GetSheet
mmdb::Model::GetSheet(int serialNum) mmdb::Model::GetSheet(const SheetID sheetID)
GetSheetID mmdb::Model
GetSheets mmdb::Model
GetSimilarity
mmdb::math::Alignment::GetSimilarity() mmdb::math::Alignment1::GetSimilarity()
GetSource mmdb::Title
GetSpace mmdb::math::Alignment
GetSpaceGroup
mmdb::Cryst::GetSpaceGroup() mmdb::Root::GetSpaceGroup()
GetSpaceGroupFix
mmdb::Cryst::GetSpaceGroupFix() mmdb::Root::GetSpaceGroupFix()
GetSSEType mmdb::Atom
GetStat mmdb::Atom
GetStopSignal mmdb::math::GraphMatch
GetStrand
mmdb::Sheet::GetStrand() mmdb::Model::GetStrand(int sheetSerNum, int strandSerNum) mmdb::Model::GetStrand(const SheetID sheetID, int strandSerNum)
GetString
mmdb::mmcif::Struct::GetString(pstr &S, cpstr TName, bool Remove=false) mmdb::mmcif::Struct::GetString(cpstr TName, int &RC) mmdb::mmcif::Loop::GetString(pstr &S, cpstr TName, int nrow, bool Remove=false) mmdb::mmcif::Loop::GetString(cpstr TName, int nrow, int &RC) mmdb::mmcif::Data::GetString(pstr &Dest, cpstr CName, cpstr TName, bool Remove=false) mmdb::mmcif::Data::GetString(cpstr CName, cpstr TName, int &RC) mmdb::GetString()
GetStrTer mmdb
GetStrTerWin32File mmdb
GetStructure mmdb::mmcif::Data
GetStructureTitle
mmdb::Root::GetStructureTitle() mmdb::Title::GetStructureTitle()
GetSVector mmdb::mmcif::Loop
GetSyminfoLib
mmdb::Cryst::GetSyminfoLib() mmdb::Root::GetSyminfoLib()
GetSymOp
mmdb::Cryst::GetSymOp() mmdb::Root::GetSymOp() mmdb::SymOp::GetSymOp() mmdb::SymOps::GetSymOp()
GetSymOpMatrix
mmdb::Cryst::GetSymOpMatrix() mmdb::Root::GetSymOpMatrix()
GetTag
mmdb::mmcif::Category::GetTag() mmdb::xml::XMLObject::GetTag()
GetTagNo mmdb::mmcif::Category
GetTMatrix
mmdb::Cryst::GetTMatrix() mmdb::Root::GetTMatrix() mmdb::SymOp::GetTMatrix() mmdb::SymOps::GetTMatrix()
GetTorsion mmdb::math
GetType
mmdb::math::Vertex::GetType() mmdb::math::Edge::GetType()
GetTypeExt mmdb::math::Vertex
GetUCTMatrix
mmdb::Cryst::GetUCTMatrix() mmdb::Root::GetUCTMatrix()
GetUDData
mmdb::Atom::GetUDData(int UDDhandle, int &iudd) mmdb::Atom::GetUDData(int UDDhandle, realtype &rudd) mmdb::Atom::GetUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::Atom::GetUDData(int UDDhandle, pstr &sudd) mmdb::Residue::GetUDData(int UDDhandle, int &iudd) mmdb::Residue::GetUDData(int UDDhandle, realtype &rudd) mmdb::Residue::GetUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::Residue::GetUDData(int UDDhandle, pstr &sudd) mmdb::Chain::GetUDData(int UDDhandle, int &iudd) mmdb::Chain::GetUDData(int UDDhandle, realtype &rudd) mmdb::Chain::GetUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::Chain::GetUDData(int UDDhandle, pstr &sudd) mmdb::Model::GetUDData(int UDDhandle, int &iudd) mmdb::Model::GetUDData(int UDDhandle, realtype &rudd) mmdb::Model::GetUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::Model::GetUDData(int UDDhandle, pstr &sudd) mmdb::Root::GetUDData(int UDDhandle, int &iudd) mmdb::Root::GetUDData(int UDDhandle, realtype &rudd) mmdb::Root::GetUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::Root::GetUDData(int UDDhandle, pstr &sudd) mmdb::UDData::getUDData(int UDDhandle, int &iudd) mmdb::UDData::getUDData(int UDDhandle, realtype &rudd) mmdb::UDData::getUDData(int UDDhandle, pstr sudd, int maxLen) mmdb::UDData::getUDData(int UDDhandle, int *retcode=NULL) mmdb::UDData::getUDData(int UDDhandle, pstr &sudd)
GetUDDHandle
mmdb::Root::GetUDDHandle() mmdb::UDRegister::GetUDDHandle()
GetUnparsedA mmdb::Root
GetUnparsedB mmdb::Root
GetUnparsedC mmdb::Root
GetUserID mmdb::math::Vertex
getVdWaalsRadius mmdb
GetVecRotMatrix mmdb
GetVecTMatrix mmdb
GetVectorMemory
mmdb::GetVectorMemory(rvector &V, word N, word Shift) mmdb::GetVectorMemory(ivector &I, word N, word Shift) mmdb::GetVectorMemory(wvector &W, word N, word Shift) mmdb::GetVectorMemory(bvector &B, word N, word Shift) mmdb::GetVectorMemory(ovector &O, word N, word Shift) mmdb::GetVectorMemory(lvector &L, word N, word Shift) mmdb::GetVectorMemory(lwvector &L, word N, word Shift) mmdb::GetVectorMemory(psvector &P, word N, word Shift)
GetVertex mmdb::math::Graph
GetVertex1 mmdb::math::Edge
GetVertex2 mmdb::math::Edge
GetVertexID mmdb::math::Graph
GetVertexNo mmdb::math::Graph
GetVertices mmdb::math::Graph
GetWarnings mmdb::mmcif::Data
GMatch mmdb::math
GMatch
mmdb::math::GMatch::GMatch() mmdb::math::GMatch::GMatch(io::RPStream Object) mmdb::math::GMatch::GMatch(ivector FV1, ivector FV2, int nv, int n, int m)
GMF_NoCombinations mmdb::math
GMF_UniqueMatch mmdb::math
GPlus mmdb::math::BFGSMin
Gradient mmdb::math::BFGSMin
GradX mmdb::math::BFGSMin
Graph mmdb::math
Graph
mmdb::math::Vertex::Graph() mmdb::math::Edge::Graph() mmdb::math::Graph::Graph() mmdb::math::Graph::Graph(PResidue R, cpstr altLoc=NULL) mmdb::math::Graph::Graph(io::RPStream Object) mmdb::math::Graph::graph()
GRAPH_BOND mmdb::math
GRAPH_FLAG mmdb::math
GRAPH_MATCH_FLAG mmdb::math
GRAPH_RC mmdb::math
GraphMatch mmdb::math
GraphMatch
mmdb::math::Vertex::GraphMatch() mmdb::math::Graph::GraphMatch() mmdb::math::GMatch::GraphMatch() mmdb::math::GraphMatch::GraphMatch() mmdb::math::GraphMatch::GraphMatch(io::RPStream Object)
GrdEps mmdb::math::BFGSMin
group mmdb::Contact
gset mmdb::math::RandomNumber
GSM_NoCell mmdb
GSM_NoSymOps mmdb
GSM_NoTransfMatrices mmdb
GSM_Ok mmdb
GSM_RC mmdb
GZ_MODE mmdb::io
gzipMode mmdb::io::File
GZM_CHECK mmdb::io
GZM_ENFORCE mmdb::io
GZM_ENFORCE_COMPRESS mmdb::io
GZM_ENFORCE_GZIP mmdb::io
GZM_NONE mmdb::io
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