a mmdb::Cryst

Abs mmdb

AC mmdb::Cryst

mmdb::Residue::AddAtom() mmdb::Chain::AddAtom(int seqNo, const InsCode insCode, PAtom atom) mmdb::Chain::AddAtom(int resNo, PAtom atom) mmdb::Brick::AddAtom() mmdb::MBrick::AddAtom() mmdb::CoorManager::AddAtom(int modelNo, const ChainID chID, int seqNo, const InsCode insCode, PAtom atom) mmdb::CoorManager::AddAtom(int modelNo, const ChainID chID, int resNo, PAtom atom) mmdb::CoorManager::AddAtom(int modelNo, int chNo, int seqNo, const InsCode insCode, PAtom atom) mmdb::CoorManager::AddAtom(int modelNo, int chNo, int resNo, PAtom atom) mmdb::Model::AddAtom(const ChainID chID, int seqNo, const InsCode insCode, PAtom atom) mmdb::Model::AddAtom(const ChainID chID, int resNo, PAtom atom) mmdb::Model::AddAtom(int chNo, int seqNo, const InsCode insCode, PAtom atom) mmdb::Model::AddAtom(int chNo, int resNo, PAtom atom)

AddAtomArray

mmdb::ProModel::AddAtomArray() mmdb::Root::AddAtomArray()

AddAttribute

mmdb::xml::XMLObject::AddAttribute(cpstr name, cpstr value) mmdb::xml::XMLObject::AddAttribute(cpstr name, const int iV) mmdb::xml::XMLObject::AddAttribute(cpstr name, const bool bV)

addBiomolecule mmdb::Title

addBMApply mmdb::Biomolecule

AddBond

mmdb::Atom::AddBond() mmdb::math::Vertex::AddBond()

AddByte mmdb::io::File

AddCategory mmdb::mmcif::Data

AddChain

mmdb::ProModel::AddChain() mmdb::CoorManager::AddChain() mmdb::Model::AddChain()

addChains mmdb::BMApply

AddCIFData mmdb::mmcif::File

AddCisPep mmdb::Model

AddContact mmdb::MContact

AddData

mmdb::ClassContainer::AddData() mmdb::xml::XMLObject::AddData()

AddEdge mmdb::math::Graph

AddField mmdb::mmcif::Struct

AddFloat mmdb::io::File

AddHetName mmdb::HetCompounds

AddInt mmdb::io::File

AddInteger mmdb::mmcif::Loop

AddKeyWord mmdb::HetCompound

AddLink mmdb::Model

AddLinkR mmdb::Model

AddLong mmdb::io::File

AddLoop mmdb::mmcif::Data

AddLoopTag mmdb::mmcif::Loop

addMatrices mmdb::BMApply

AddMMCIFCategory mmdb::xml::XMLObject

AddMMCIFData mmdb::xml::XMLObject

AddMMCIFLoop mmdb::xml::XMLObject

AddMMCIFStruct mmdb::xml::XMLObject

AddModel mmdb::CoorManager

AddMTRIXLine mmdb::CrystContainer

AddNCSMatrix

mmdb::Cryst::AddNCSMatrix() mmdb::Root::AddNCSMatrix()

AddNoData mmdb::mmcif::Loop

AddObject mmdb::xml::XMLObject

AddPDBASCII mmdb::Root

AddPDBASCII1 mmdb::Root

AddReal

mmdb::io::File::AddReal() mmdb::mmcif::Loop::AddReal(realtype R, int prec=8) mmdb::mmcif::Loop::AddReal(realtype R, cpstr format)

AddRenChain mmdb::GenSym

AddResidue

mmdb::Chain::AddResidue() mmdb::CoorManager::AddResidue(int modelNo, const ChainID chainID, PResidue res) mmdb::CoorManager::AddResidue(int modelNo, int chainNo, PResidue res) mmdb::Model::AddResidue(const ChainID chainID, PResidue res) mmdb::Model::AddResidue(int chainNo, PResidue res)

AddShort mmdb::io::File

AddString mmdb::mmcif::Loop

AddStructConfTags mmdb

AddStructConnLinkRTags mmdb

AddStructConnTags mmdb

AddStructure mmdb::mmcif::Data

AddSymOp

mmdb::GenSym::AddSymOp() mmdb::SymOps::AddSymOp()

AddTag mmdb::mmcif::Category

AddVertex mmdb::math::Graph

AddWord mmdb::io::File

AdjustEnds

mmdb::math::Alignment::AdjustEnds() mmdb::math::Alignment1::AdjustEnds()

ALF_EmptyAltLoc mmdb

ALF_Mess mmdb

ALF_NoAltCodes mmdb

ALF_NoEmptyAltLoc mmdb

ALF_Occupancy mmdb

AlgnLen mmdb::math::Alignment1

AlgnS

mmdb::math::Alignment::AlgnS() mmdb::math::Alignment1::AlgnS()

AlgnT

mmdb::math::Alignment::AlgnT() mmdb::math::Alignment1::AlgnT()

Align

mmdb::SeqSuperpose::Align() mmdb::math::Alignment::Align() mmdb::math::Alignment1::Align()

ALIGN_FREEENDS mmdb::math

ALIGN_GLOBAL mmdb::math

ALIGN_GLOBLOC mmdb::math

ALIGN_LOCAL mmdb::math

ALIGN_METHOD mmdb::math

AlignKey

mmdb::math::Alignment::AlignKey() mmdb::math::Alignment1::AlignKey()

Alignment

mmdb::math::Alignment::Alignment() mmdb::math::Alignment::Alignment(io::RPStream Object)

Alignment mmdb::math

Alignment1

mmdb::math::Alignment1::Alignment1() mmdb::math::Alignment1::Alignment1(io::RPStream Object)

Alignment1 mmdb::math

AlignParams mmdb::math

AlignParams

mmdb::math::AlignParams::AlignParams() mmdb::math::AlignParams::AlignParams(io::RPStream Object)

AllocateAtom mmdb::Root

allowDuplChID mmdb::Root

aloc1

mmdb::Link::aloc1() mmdb::LinkR::aloc1()

aloc2

mmdb::Link::aloc2() mmdb::LinkR::aloc2()

alpha mmdb::Cryst

alphas mmdb::Cryst

altLoc

mmdb::Atom::altLoc() mmdb::AtomPath::altLoc() mmdb::AltLoc()

ALTLOC_FLAG mmdb

ANY_RES mmdb

APATH_AltLoc mmdb

APATH_AtomName mmdb

APATH_ChainID mmdb

APATH_Element mmdb

APATH_FLAG mmdb

APATH_Incomplete mmdb

APATH_InsCode mmdb

APATH_ModelNo mmdb

APATH_ResName mmdb

APATH_SeqNum mmdb

APATH_WC_AltLoc mmdb

APATH_WC_AtomName mmdb

APATH_WC_ChainID mmdb

APATH_WC_Element mmdb

APATH_WC_InsCode mmdb

APATH_WC_ModelNo mmdb

APATH_WC_ResName mmdb

APATH_WC_SeqNum mmdb

apireal mmdb::machine

Append

mmdb::ContainerClass::Append() mmdb::ContString::Append() mmdb::io::File::append()

ApplyNCSTransform mmdb::Root

ApplySymTransform mmdb::CoorManager

ApplyTransform

mmdb::Residue::ApplyTransform() mmdb::Chain::ApplyTransform() mmdb::CoorManager::ApplyTransform() mmdb::Model::ApplyTransform()

ARCH_COMPRESS mmdb_io_file.cpp

ARCH_ENFORCE mmdb_io_file.cpp

ARCH_GZIP mmdb_io_file.cpp

ARCH_NONE mmdb_io_file.cpp

areBricks mmdb::CoorManager

areMatrices mmdb::Cryst

areMBricks mmdb::CoorManager

as mmdb::Cryst

ASET_All mmdb

ASET_Anis_tFac mmdb

ASET_Anis_tFSigma mmdb

ASET_Charge mmdb

ASET_Coordinates mmdb

ASET_CoordSigma mmdb

ASET_FLAG mmdb

ASET_OccSigma mmdb

ASET_Occupancy mmdb

ASET_ShortBinary mmdb_atom.cpp

ASET_ShortHet mmdb_atom.cpp

ASET_ShortTer mmdb_atom.cpp

ASET_tempFactor mmdb

ASET_tFacSigma mmdb

assign

mmdb::io::File::assign(cpstr FileName, bool Text=false, bool UniB=false, GZ_MODE gzMode=GZM_NONE) mmdb::io::File::assign(word poolSize, word sizeInc, pstr filePool) mmdb::mmcif::assign()

AtmLen

mmdb::Residue::AtmLen() mmdb::Root::atmLen()

atName1

mmdb::Link::atName1() mmdb::LinkR::atName1()

atName2

mmdb::Link::atName2() mmdb::LinkR::atName2()

Atom

mmdb::Residue::Atom() mmdb::Chain::Atom() mmdb::Model::Atom() mmdb::Root::Atom() mmdb::Atom::Atom() mmdb::Atom::Atom(PResidue res) mmdb::Atom::Atom(io::RPStream Object) mmdb::AtomBond::atom() mmdb::Residue::atom() mmdb::Brick::atom() mmdb::MBrick::atom() mmdb::MContact::atom() mmdb::Root::atom()

Atom mmdb

ATOM_LEAVING mmdb::math

ATOM_NoSeqNum mmdb

AtomBond mmdb

AtomBondI mmdb

atomName

mmdb::AtomPath::atomName() mmdb::AtomName()

AtomPath mmdb

AtomPath

mmdb::AtomPath::AtomPath() mmdb::AtomPath::AtomPath(cpstr ID) mmdb::AtomPath::AtomPath(io::RPStream Object)

AtomStat mmdb

attr_name mmdb::xml::XMLObject

attr_value mmdb::xml::XMLObject

Author mmdb

author

mmdb::Title::author() mmdb::Author::Author() mmdb::Author::Author(cpstr S) mmdb::Author::Author(io::RPStream Object)