src/mmdb_utils.h File Reference

#include "mmdb_io_stream.h"
#include "mmdb_mmcif_.h"
#include "mmdb_defs.h"

Go to the source code of this file.

Classes
class	mmdb::ContainerClass
class	mmdb::ContString
class	mmdb::ClassContainer
class	mmdb::AtomPath
class	mmdb::QuickSort
Namespaces
namespace	mmdb
Enumerations
enum	mmdb::APATH_FLAG {   mmdb::APATH_ModelNo = 0x00000001, mmdb::APATH_ChainID = 0x00000002, mmdb::APATH_SeqNum = 0x00000004, mmdb::APATH_InsCode = 0x00000008,   mmdb::APATH_ResName = 0x00000010, mmdb::APATH_AtomName = 0x00000020, mmdb::APATH_Element = 0x00000040, mmdb::APATH_AltLoc = 0x00000080,   mmdb::APATH_Incomplete = 0x00000100, mmdb::APATH_WC_ModelNo = 0x00001000, mmdb::APATH_WC_ChainID = 0x00002000, mmdb::APATH_WC_SeqNum = 0x00004000,   mmdb::APATH_WC_InsCode = 0x00008000, mmdb::APATH_WC_ResName = 0x00010000, mmdb::APATH_WC_AtomName = 0x00020000, mmdb::APATH_WC_Element = 0x00040000,   mmdb::APATH_WC_AltLoc = 0x00080000 }
Functions
void	mmdb::Date9to11 (cpstr Date9, pstr Date11)
void	mmdb::Date11to9 (cpstr Date11, pstr Date9)
void	mmdb::Date9toCIF (cpstr Date9, pstr DateCIF)
void	mmdb::Date11toCIF (cpstr Date11, pstr DateCIF)
void	mmdb::DateCIFto9 (cpstr DateCIF, pstr Date9)
void	mmdb::DateCIFto11 (cpstr DateCIF, pstr Date11)
bool	mmdb::GetInteger (int &N, cpstr S, int M)
bool	mmdb::GetReal (realtype &R, cpstr S, int M)
bool	mmdb::GetIntIns (int &N, pstr ins, cpstr S, int M)
void	mmdb::PutInteger (pstr S, int N, int M)
void	mmdb::PutRealF (pstr S, realtype R, int M, int L)
void	mmdb::PutIntIns (pstr S, int N, int M, cpstr ins)
ERROR_CODE	mmdb::CIFGetInteger (int &I, mmcif::PStruct Struct, cpstr Tag, bool Remove)
ERROR_CODE	mmdb::CIFGetReal (realtype &R, mmcif::PStruct Struct, cpstr Tag, bool Remove)
ERROR_CODE	mmdb::CIFGetString (pstr S, mmcif::PStruct Struct, cpstr Tag, int SLen, cpstr DefS, bool Remove)
ERROR_CODE	mmdb::CIFGetInteger (int &I, mmcif::PLoop Loop, cpstr Tag, int &Signal)
ERROR_CODE	mmdb::CIFGetIntegerD (int &I, mmcif::PLoop Loop, cpstr Tag, int defValue)
ERROR_CODE	mmdb::CIFGetInteger1 (int &I, mmcif::PLoop Loop, cpstr Tag, int nrow)
ERROR_CODE	mmdb::CIFGetReal (realtype &R, mmcif::PLoop Loop, cpstr Tag, int &Signal)
ERROR_CODE	mmdb::CIFGetReal1 (realtype &R, mmcif::PLoop Loop, cpstr Tag, int nrow)
ERROR_CODE	mmdb::CIFGetString (pstr S, mmcif::PLoop Loop, cpstr Tag, int row, int SLen, cpstr DefS)
void	mmdb::Mat4Inverse (mat44 &A, mat44 &AI)
void	mmdb::Mat4Mult (mat44 &A, mat44 &B, mat44 &C)
void	mmdb::Mat4Div1 (mat44 &A, mat44 &B, mat44 &C)
void	mmdb::Mat4Div2 (mat44 &A, mat44 &B, mat44 &C)
realtype	mmdb::Mat4RotDet (mat44 &T)
void	mmdb::Mat4Init (mat44 &A)
void	mmdb::Mat3Init (mat33 &A)
realtype	mmdb::Mat3Inverse (mat33 &A, mat33 &AI)
bool	mmdb::isMat4Unit (mat44 &A, realtype eps, bool rotOnly)
void	mmdb::Mat4Copy (mat44 &A, mat44 &ACopy)
void	mmdb::Mat3Copy (mat33 &A, mat33 &ACopy)
bool	mmdb::isMat4Eq (mat44 &A, mat44 &B, realtype eps, bool rotOnly)
void	mmdb::TransformXYZ (mat44 &T, realtype &X, realtype &Y, realtype &Z)
realtype	mmdb::TransformX (mat44 &T, realtype X, realtype Y, realtype Z)
realtype	mmdb::TransformY (mat44 &T, realtype X, realtype Y, realtype Z)
realtype	mmdb::TransformZ (mat44 &T, realtype X, realtype Y, realtype Z)
cpstr	mmdb::GetErrorDescription (ERROR_CODE ErrorCode)
	mmdb::DefineClass (ContainerClass)
	mmdb::DefineStreamFunctions (ContainerClass)
	mmdb::DefineClass (ContString)
	mmdb::DefineStreamFunctions (ContString)
	mmdb::DefineClass (ClassContainer)
	mmdb::DefineStreamFunctions (ClassContainer)
	mmdb::DefineClass (AtomPath)
	mmdb::DefineStreamFunctions (AtomPath)
	mmdb::DefineClass (QuickSort)
void	mmdb::takeWord (pstr &p, pstr wrd, cpstr ter, int l)
void	mmdb::ParseAtomID (cpstr ID, AtomName aname, Element elname, AltLoc aloc)
int	mmdb::ParseResID (cpstr ID, int &sn, InsCode inscode, ResName resname)
int	mmdb::ParseAtomPath (cpstr ID, int &mdl, ChainID chn, int &sn, InsCode ic, ResName res, AtomName atm, Element elm, AltLoc aloc, PAtomPath DefPath)
int	mmdb::ParseSelectionPath (cpstr CID, int &iModel, pstr Chains, int &sNum1, InsCode ic1, int &sNum2, InsCode ic2, pstr RNames, pstr ANames, pstr Elements, pstr altLocs)
void	mmdb::MakeSelectionPath (pstr CID, int iModel, cpstr Chains, int sNum1, const InsCode ic1, int sNum2, const InsCode ic2, cpstr RNames, cpstr ANames, cpstr Elements, cpstr altLocs)