This is the complete list of members for
ssm::Align, including all inherited members.
| Align() | ssm::Align | |
| Align(mmdb::io::RPStream Object) | ssm::Align | |
| align(mmdb::PManager M1, mmdb::PManager M2, PRECISION precision, CONNECTIVITY connectivity, int selHnd1=0, int selHnd2=0) | ssm::Align | |
| AlignSelectedMatch(mmdb::PManager M1, mmdb::PManager M2, PRECISION precision, CONNECTIVITY connectivity, int selHnd1=0, int selHnd2=0, int nselect=0) | ssm::Align | |
| Ca1 | ssm::Align | |
| Ca2 | ssm::Align | |
| cnCheck | ssm::Align | |
| dist1 | ssm::Align | |
| FreeMemory() | ssm::Align | [protected] |
| G1 | ssm::Align | |
| G2 | ssm::Align | |
| GetNMatches() const | ssm::Align | [inline] |
| GetQvalues() const | ssm::Align | [inline] |
| GetSuperpose() | ssm::Align | [inline] |
| InitAlign() | ssm::Align | [protected] |
| MakeSelections(mmdb::PManager M1, int selHnd1, mmdb::PManager M2, int selHnd2) | ssm::Align | [protected] |
| MapSelections(int &selHndCa, mmdb::PManager M, PGraph G, int selHnd, mmdb::ivector &newID) | ssm::Align | [protected] |
| nalgn | ssm::Align | |
| ncombs | ssm::Align | |
| ngaps | ssm::Align | |
| nMatches | ssm::Align | [protected] |
| nmd | ssm::Align | |
| nres1 | ssm::Align | |
| nres2 | ssm::Align | |
| nsel1 | ssm::Align | |
| nsel2 | ssm::Align | |
| pqvalues | ssm::Align | [protected] |
| Qscore | ssm::Align | |
| read(mmdb::io::RFile f) | ssm::Align | |
| rmsd | ssm::Align | |
| selHndCa1 | ssm::Align | |
| selHndCa2 | ssm::Align | |
| seqIdentity | ssm::Align | |
| superpose | ssm::Align | [protected] |
| TMatrix | ssm::Align | |
| U | ssm::Align | [protected] |
| write(mmdb::io::RFile f) | ssm::Align | |
| ~Align() | ssm::Align | |