{- begin block parameter definition -} define( {============================ space group ============================} {* space group *} {* use International Table conventions with subscripts substituted by parenthesis *} {===>} sg="C2"; {==================== derivative/MAD coordinates =====================} {+ list: for each site define: - whether the site is to be refined, fixed or ignored - derivative name (must be the same for all sites in a derivative) - chemical type (note: wavelength-dependent form factors are specified in mad_refine.inp) - coordinates (x, y, z) - B-value (b) - occupancy (q) - group name (g) +} {+ list: the optional group name (g) is a string of upto 4 characters. If a group is left blank, each site is refined individually. If a group is specified, all sites with the same group name and the same derivative name are treated as a rigid body, and their occupancies, B-values, and form factors are refined as a group. +} {+ table: rows=12 numbered cols=9 "action" "derivative name" "chemical type" "x coordinate" "y coordinate" "z coordinate" "B-value" "occupancy" "group" +} {+ choice: "refine" "fix" "ignore" +} {===>} site.action_1="refine"; {===>} site.segid_1="SITE"; site.type_1="SE"; {===>} site.x_1=25.9407; site.y_1=-0.103471; site.z_1=17.4094; {===>} site.b_1=15.2561; site.q_1=1; site.g_1=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_2="refine"; {===>} site.segid_2="SITE"; site.type_2="SE"; {===>} site.x_2=30.6534; site.y_2=6.62359; site.z_2=9.93063; {===>} site.b_2=12.9102; site.q_2=1; site.g_2=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_3="refine"; {===>} site.segid_3="SITE"; site.type_3="SE"; {===>} site.x_3=-3.26506; site.y_3=15.5546; site.z_3=53.9529; {===>} site.b_3=30.5239; site.q_3=1; site.g_3=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_4="refine"; {===>} site.segid_4="SITE"; site.type_4="SE"; {===>} site.x_4=6.72299; site.y_4=19.4832; site.z_4=8.63983; {===>} site.b_4=26.8762; site.q_4=1; site.g_4=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_5="refine"; {===>} site.segid_5="SITE"; site.type_5="SE"; {===>} site.x_5=22.9334; site.y_5=16.5635; site.z_5=5.75708; {===>} site.b_5=36.7177; site.q_5=1; site.g_5=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_6="refine"; {===>} site.segid_6="SITE"; site.type_6="SE"; {===>} site.x_6=30.4688; site.y_6=26.591; site.z_6=33.5127; {===>} site.b_6=39.8565; site.q_6=1; site.g_6=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_7="refine"; {===>} site.segid_7="SITE"; site.type_7="SE"; {===>} site.x_7=15.7641; site.y_7=5.27566; site.z_7=27.8344; {===>} site.b_7=27.7895; site.q_7=1; site.g_7=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_8="refine"; {===>} site.segid_8="SITE"; site.type_8="SE"; {===>} site.x_8=13.4265; site.y_8=29.25; site.z_8=15.2727; {===>} site.b_8=37.0449; site.q_8=1; site.g_8=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_9="refine"; {===>} site.segid_9="SITE"; site.type_9="SE"; {===>} site.x_9=45.701; site.y_9=21.8122; site.z_9=1.0788; {===>} site.b_9=45.4082; site.q_9=1; site.g_9=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_10="refine"; {===>} site.segid_10="SITE"; site.type_10="SE"; {===>} site.x_10=-4.21724; site.y_10=19.9247; site.z_10=29.6409; {===>} site.b_10=48.107; site.q_10=1; site.g_10=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_11="refine"; {===>} site.segid_11="SITE"; site.type_11="SE"; {===>} site.x_11=11.6715; site.y_11=21.1399; site.z_11=48.2842; {===>} site.b_11=49.5962; site.q_11=1; site.g_11=""; {+ choice: "refine" "fix" "ignore" +} {===>} site.action_12="refine"; {===>} site.segid_12="SITE"; site.type_12="SE"; {===>} site.x_12=44.7018; site.y_12=17.2357; site.z_12=13.4847; {===>} site.b_12=56.385; site.q_12=1; site.g_12=""; {* to appended new entries or merge this file with other site database files use sdb_manipulate.inp *} {* to delete sites from this file either set the derivative name to be blank or use delete_sites.inp *} {===========================================================================} { things below this line do not normally need to be changed } {===========================================================================} ) {- end block parameter definition -}