gsmt::XAlign Member List

This is the complete list of members for gsmt::XAlign, including all inherited members.

a1	gsmt::XAlign	[protected]
a2	gsmt::XAlign	[protected]
algnLen	gsmt::XAlign	[protected]
Align(mmdb::PPAtom Calpha1, mmdb::ivector Ca1, int nat1, mmdb::PPAtom Calpha2, mmdb::ivector Ca2, int nat2, mmdb::rvector dist1, int &nr)	gsmt::XAlign
alignXBlocks(RXBlock B1, RXBlock B2, int &nr)	gsmt::XAlign	[protected]
alpha1	gsmt::XAlign	[protected]
alpha2	gsmt::XAlign	[protected]
customInit()	gsmt::XAlign	[protected, virtual]
d1	gsmt::XAlign	[protected]
FreeMemory()	gsmt::XAlign	[protected, virtual]
GetNCols2()	gsmt::XAlign	[inline]
makeRow(mmdb::PAtom A1, int sseType1, mmdb::PAtom A2, int sseType2, mmdb::realtype dist, int rowNo, int icol, bool aligned)	gsmt::XAlign	[protected, virtual]
makeXBlocks(mmdb::ivector Ca, int nat, RPXBlock XB, int &nBlocks)	gsmt::XAlign	[protected]
maxdist	gsmt::XAlign	[protected]
na1	gsmt::XAlign	[protected]
na2	gsmt::XAlign	[protected]
nBlock1	gsmt::XAlign	[protected]
nBlock2	gsmt::XAlign	[protected]
nCols1	gsmt::XAlign	[protected]
nCols2	gsmt::XAlign	[protected]
nRows	gsmt::XAlign	[protected]
XAlign()	gsmt::XAlign
XBlock1	gsmt::XAlign	[protected]
XBlock2	gsmt::XAlign	[protected]
~XAlign()	gsmt::XAlign