DEF martin 0.0.1 phaser_EP_AUTO 09:40 23/Dec/12 CString Base output filename CString Title CBoolean Verbose output CBoolean Print debugging output CBoolean Suppress output 2 CBoolean Write PDB file 2 True CBoolean Write PDB files of ensembles to separate files for each solution 3 True CBoolean Write MTZ file True CInt Number of parallel threads 2 CBoolean Write keywords (script) file 2 False CString Cluster compound pdb file CString Heavy atom hand off,on,both both Use given hand,Use opposite hand,Both hands 1 CBoolean Write out LLG maps 1 False CFloat Percentage of resharpening factor to apply 2 100.0 CBoolean If the R-factor is low for ensemble at origin then abort MR 1 True CFloat If the R-factor is below this cutoff for ensemble at origin then abort MR 1 35.0 CString Specify expected model accuracy by %ID or RMSD True ID,RMS ID CFloat %ID or RMSD of model 0.8 CObsDataFile 1,2 True False True CString True NONE,MODEL,MAP Partial heavy atom substructure,Partial protein/nucleic acid model,Map coefficients for protein/nucleic acid NONE CPdbDataFile True True True CMapCoeffsDataFile True True True True 1 1 CPdbDataFile True True True 4,0 CAsuComponentList True CString MW,ASU 1 MW CFloat CFloat CFloat 0 CFloat 0 CFloat 1.5418 0.2 9.0 CBoolean Search for "pure anomalous" scatterers...for analysis not phasing False CInt 1 CList CString 0 CXmlDataFile CList CMtzDataFile False CList CMapCoeffsDataFile True 1 2 CList CMapCoeffsDataFile True 1 1 CList CPdbDataFile True CList CPhsDataFile 1