ó
²™xTc           @   s«  d  d l  m Z d  d l Z d  d l m Z m Z d  d l m Z m Z m	 Z	 m
 Z
 m Z m Z e e e j e j ƒ ƒ Z i d d 6d d 6d d	 6d
 d 6d d 6Z d „  Z e d „ Z d „  Z d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d „  ƒ  YZ d e f d  „  ƒ  YZ d! e f d" „  ƒ  YZ  d# e f d$ „  ƒ  YZ! d% „  Z" d S(&   iÿÿÿÿ(   t   divisionN(   t   polygont   model_vs_data(   t   pit   cost   sint   radianst   degreest   floors   %.4ft   r_workt   r_frees   %.3ft	   bond_rmsds   %.2ft
   angle_rmsds   %.1ft   adp_mean_allc         C   s=   i  } x0 |  D]( \ } } t  j d | d d ƒ | | <q W| S(   Nt   datat   n_slotsi
   (   R   t   convert_to_histogram(   t   polygon_resultt
   histogramst   statR   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   convert_histogram_data   s
    c      	   C   sï   |  j  } t j |  ƒ } |  j } | j ƒ  j } i  } g  } x^ | j j D]P }	 t | |	 d  ƒ }
 |
 d  k	 rƒ |	 G|
 GH|
 | |	 <qI d |	 GH| j
 |	 ƒ qI Wx! | D] }	 | j j j |	 ƒ q¤ Wt j d | d | d | d t ƒ } | | f S(   Ns   Error: got 'None' for %st   paramst   d_mint   show_histogramst   extract_gui_data(   t   pdb_fileR   t   summarize_resultst   fmodelt   infoR   R   t   keys_to_showt   getattrt   Nonet   appendt   removet   True(   t
   mvd_objectR   t   debugR   t   mvd_resultsR   R   t   statst   invalid_statst	   stat_namet   valueR   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   get_stats_and_histogram_data   s(    					c      	   C   s[   t  j j ƒ  j ƒ  } d d d d d d g | j  _ t  j  d | d |  d	 t d
 t ƒ } | S(   NR	   R
   R   R   R   t
   clashscoreR   R   R   R   (   R   t   master_paramst   fetcht   extractR   t   FalseR"   (   R   R   R   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   get_basic_histogram_data-   s    	t   rendererc           B   s‰   e  Z d  d d d d d d g Z d d d d	 „ Z d
 „  Z e d „ Z d „  Z d „  Z d „  Z	 d „  Z
 d „  Z d „  Z d „  Z RS(   gš™™™™™¹?g      Ð?g      à?g      ð?g       @g      @g      @g333333Ó?gš™™™™™™?c         C   s­  d |  _  t | ƒ } | |  _ d |  _ t j } d  |  _ x– | j ƒ  D]ˆ \ } }	 d }
 x3 |	 j	 ƒ  D]% } |
 | 7}
 | | k rf | } qf qf W|  j d  k rG t
 |
 ƒ t
 |	 j	 ƒ  j ƒ  ƒ |  _ |
 |  _ qG qG W| |  _ g  |  _ t d ƒ } d } t | ƒ } d t t
 | ƒ } xa | j ƒ  D]S \ } }	 | | d | } t | |	 | | | | ƒ } |  j j | ƒ | d 7} q$Wt |  j |  j ƒ |  _ |  j d ƒ t |  _ d  S(   Ni   i    iZ   g       @g      à?t   rainbow(   t   unitsR   R&   t   n_pdbt   syst   maxintR   t   slot_avgt	   iteritemst   slotst   floatt   sizet   maxt   _histogramsR   t   lenR   t   histogram_layoutR    t   polygon_layoutt   _polygont   set_color_modelR/   t   relative_scale_colors(   t   selft   histogram_datat   structure_statst   histogram_lengtht   centert   center_offsetR   R<   t   stat_keyt	   histogramR4   t   slott   initial_anglet   it   n_statst   intervalt   anglet   layout(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   __init__:   s<    			
	
%		c         C   s1   | \ |  _  |  _ t |  j  |  j g ƒ |  _ d  S(   N(   t   wt   ht   minR3   (   RD   R;   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   resize[   s    c         C   sÙ   | |  _  | |  _ | d k r- t ƒ  |  _ n� | d k rH t ƒ  |  _ nu | d k rc t ƒ  |  _ nZ | d k r~ t ƒ  |  _ n? | d k r™ t ƒ  |  _ n$ | d k r½ t ƒ  |  _ d	 |  _	 n  | d k rÕ d
 |  _	 n  d  S(   Nt   originalR2   t   rmbt   bluet   redt   grayiÿ   i    (   iÿ   i    i    (   i    i    i    (
   RC   t   color_modelt   original_color_modelt   colorst   rainbow_color_modelt   rmb_color_modelt   blue_color_modelt   red_color_modelt   grayscale_color_modelt
   line_color(   RD   t
   model_namet   relative_scaling(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRB   _   s"    		c         C   s‡   |  j  r |  j j |  j j f Sd d d g } g  | D] } t | |  j ƒ ^ q5 } g  | D] } |  j j | ƒ ^ q[ } | | f Sd  S(   Ng        g      à?g      ð?(   RC   R_   t   ratio_gradientt   ratio_cutoffst   intR<   t   get_bin_color(   RD   t   levelst   xt   cutoffsR_   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   get_color_keyr   s    	&%c         C   sÜ  |  j  j d |  j d |  j d |  j d |  j ƒ } x>t |  j ƒ D]-\ } } xt | j ƒ D]ÿ \ } \ } } t | j	 ƒ d } t
 | j	 ƒ d }	 |  j | d | |  j | d |	 f |  j | d | |  j | d |	 f |  j | d | |  j | d |	 f |  j | d | |  j | d |	 f g }
 |  j d | d	 |
 d
 | | | ƒ q_ W| j d |  j | j d |  j f } | j } | d k r¨d } nT | d k r½d } n? | d k rÒd } n* | d k rçd } n | d k rüd } n  |  j d | d | j d |  j | j | j ƒ d |  j | j | j ƒ d |  j |  j | | j ƒ d | d | j	 ƒ qC Wxa |  j j |  j ƒ D]J \ } } } | r»|  j | | | |  j ƒ qŠ|  j | | | |  j ƒ qŠWd  S(   NR   R<   t   meanRg   g{®Gáz„?i    i   t   outt   pointst   colort   angles_rmsdR   t
   bonds_rmsdR   t   adp_meanR   t   r_work_re_computedR	   t   r_free_re_computedR
   t   labelRV   R)   t   posRQ   (   R_   t   get_histogram_colorsR=   R<   R7   RC   t	   enumeratet   linesR   RQ   R   R3   t   draw_boxt   text_anchort   namet   draw_labelsRy   t   format_valueRV   R&   RA   t   get_line_segmentst   draw_dashed_lineRe   t   draw_solid_line(   RD   Rq   R_   RN   RK   t   jt   startt   endt   dxt   dyRr   t   anchorRJ   t   dashed(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   draw{   sT    			"'''-									%c         C   s   t  ƒ  ‚ d  S(   N(   t   NotImplementedError(   RD   Rq   Rr   Rs   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR~   ª   s    c         C   s   t  ƒ  ‚ d  S(   N(   RŽ   (   RD   Rq   R‡   Rˆ   Rs   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR…   ­   s    c         C   s   t  ƒ  ‚ d  S(   N(   RŽ   (   RD   Rq   R‡   Rˆ   Rs   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR„   °   s    c         C   s   t  ƒ  ‚ d  S(   N(   RŽ   (   RD   Rq   Ry   RV   R<   R)   Rz   RQ   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR�   ³   s    c         C   s$   | t  k r t  | | Sd | Sd  S(   Ns   %.3f(   t   stat_formats(   RD   R)   R(   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR‚   ¶   s    (   g      à?g      à?(   t   __name__t
   __module__Ri   RS   RW   R"   RB   Ro   R�   R~   R…   R„   R�   R‚   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR1   7   s    				/				R?   c           B   s,   e  Z d  „  Z d „  Z d „  Z d „  Z RS(   c         C   sö  | |  _  | t k r% t | |  _ n	 | |  _ | j ƒ  } | j ƒ  } g  | j ƒ  D] }	 |	 ^ qS }
 t |
 ƒ } | \ } } | t | ƒ | } | t | ƒ | } g  |  _	 | t | ƒ | d | t | ƒ | d f |  _
 xÆ t |
 ƒ D]¸ \ } } | t | ƒ t | ƒ } | t | d ƒ t | ƒ } | t | ƒ | | t | ƒ | } } | t | ƒ | | t | ƒ | } } |  j	 j | | f | | f f ƒ qî W| |  _ | |  _ |
 |  _ | |  _ | |  _ | |  _ | |  _ | |  _ d  S(   Ng{®Gáz„?i   (   R€   t
   stat_namesRy   t   data_mint   data_maxR9   R>   R   R   R}   R   R|   R:   R    R<   RV   t   binsRQ   t   lengtht   n_binst   x_startt   y_start(   RD   R€   RK   RQ   R–   RH   RI   RV   R<   RL   R•   R—   t   center_xt   center_yR˜   R™   RN   t   bint
   start_fract   end_fract   line_x_startt   line_y_startt
   line_x_endt
   line_y_end(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS   ½   s>    										c         C   s   | |  _  d  S(   N(   t
   bin_colors(   RD   R£   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt
   set_colorsà   s    c         C   s©   t  } | |  j |  j |  j } | d k r< d } t } n | d k  rW d } t } n  |  j t |  j ƒ |  j | } |  j t	 |  j ƒ |  j | } | | f | f S(   Ng      ð?g        (
   R"   RV   R<   R/   R˜   R   RQ   R–   R™   R   (   RD   R   t   point_on_histogramt   hist_xt   poly_xt   poly_y(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   get_polygon_intersectionã   s    		!!c         C   sÿ   |  j  } |  j \ } } | t d ƒ k r_ | t d ƒ k  r_ | t d d } | t d } n– | t d ƒ k r¢ | t d ƒ k  r¢ | t d } | t d } nS | t d ƒ k rÝ | t d ƒ k  rÝ | t d } | } n | d } | t d } | | f S(   Ni<   ix   i   i   i   ið   i,  (   RQ   R   R   RT   RU   (   RD   R3   RQ   Rm   t   yt   text_xt   text_y(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   get_absolute_label_positionð   s    	$$$	
(   R�   R‘   RS   R¤   R©   R­   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR?   ¼   s   	#		R@   c           B   s   e  Z d  „  Z d d „ Z RS(   c         C   sì   g  } g  } x  | D]˜ } | j  | k r. q n  | | j  } t | t ƒ rp t d d | j  t | ƒ f ƒ ‚ n  | j | ƒ \ \ } } }	 | j | | f ƒ | j |	 ƒ q W| |  _ x- t | ƒ D] \ }
 \ } } | |
 rÅ qÅ qÅ Wd  S(   Ns/   Invalid type 'list' for POLYGON statistic '%s' s   (values: %s).(	   R€   t
   isinstancet   listt   RuntimeErrort   strR©   R    t   intersectionsR|   (   RD   R&   t   histogram_layoutsR²   t   on_histogramRK   R   Rm   Rª   R¥   RN   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS     s      	
g      ð?c         c   s{   xt t  |  j ƒ D]c \ } } |  j | d } | d | | d | f } | d | | d | f } | | t f Vq Wd  S(   Ni   i    (   R|   R²   R/   (   RD   R3   RN   t   _endt   _startR‡   Rˆ   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRƒ     s
    (   R�   R‘   RS   Rƒ   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR@     s   	R]   c           B   s&   e  Z d  „  Z e d „ Z d „  Z RS(   c         C   s   g  |  _  g  |  _ d  S(   N(   Ri   Rh   (   RD   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS     s    	c         C   s/  t  |  j ƒ t  |  j ƒ d k s( t ‚ g  } |  j } xñ | D]é } g  } | rÚ xÇ | j D]y }	 |	 | }
 d  } x7 t | ƒ D]) \ } } | |
 k r} |  j | } Pq} q} W| d  k rÆ |  j d } n  | j | ƒ qZ Wn@ x= | j D]2 }	 t |	 ƒ t | ƒ }
 | j |  j	 |
 ƒ ƒ qä W| j | ƒ q> W| S(   Ni   iÿÿÿÿ(
   R>   Rh   Ri   t   AssertionErrorR•   R   R|   R    R:   Rk   (   RD   R   R<   Rp   Rg   R_   Ri   RK   R£   Rœ   t   valt   cRN   t   cutoff(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR{   !  s*    (	
c         C   s   d S(   Ni    (   i    i    i    (    (   RD   R)   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   :  s    (   R�   R‘   RS   R"   R{   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR]     s   	R^   c           B   s   e  Z d  „  Z RS(   c      
   C   sC   d d d d d d d g |  _  d d d d d d d d g |  _ d  S(   Ngš™™™™™¹?g      Ð?g      à?g      ð?g       @g      @g      @ið   iÿ   i    i–   i‚   (   ið   ið   ið   (   iÿ   i    i    (   iÿ   i–   i    (   iÿ   iÿ   i    (   i    iÿ   i    (   i    iÿ   iÿ   (   i    i    iÿ   (   i‚   i    iÿ   (   Ri   Rh   (   RD   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS   >  s    (   R�   R‘   RS   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR^   =  s   Rb   c           B   s   e  Z d  „  Z RS(   c         C   s   t  d | d ƒ S(   Nið   i   (   t   hsv2rgb(   RD   R)   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   K  s    (   R�   R‘   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRb   J  s   Rc   c           B   s   e  Z d  „  Z RS(   c         C   s   t  d | d ƒ S(   Ni    i   (   R»   (   RD   R)   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   O  s    (   R�   R‘   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRc   N  s   Rd   c           B   s   e  Z d  „  Z RS(   c         C   s   t  d d d | ƒ S(   Ni    i   (   R»   (   RD   R)   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   S  s    (   R�   R‘   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRd   R  s   R`   c           B   s   e  Z d  „  Z d „  Z RS(   c         C   su   d d d d d d d g |  _  g  g  t d ƒ D] } t | ƒ d	 ^ q. D]  } t d
 d
 | d d ƒ ^ qH |  _ d  S(   Ngš™™™™™¹?g      Ð?g      à?g      ð?g       @g      @g      @i   g      @g      n@i   (   Ri   t   rangeR:   R»   Rh   (   RD   Rm   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS   W  s    c         C   s   t  d d | d d ƒ } | S(   Ng      n@i   (   R»   (   RD   R)   Rs   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   \  s    (   R�   R‘   RS   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR`   V  s   	Ra   c           B   s   e  Z d  „  Z d „  Z RS(   c         C   su   d d d d d d d g |  _  g  g  t d ƒ D] } t | ƒ d	 ^ q. D]  } t d
 d | d d ƒ ^ qH |  _ d  S(   Ngš™™™™™¹?g      Ð?g      à?g      ð?g       @g      @g      @i   g      @g      n@g      ^@i   (   Ri   R¼   R:   R»   Rh   (   RD   Rm   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRS   a  s    c         C   s   t  d d | d d ƒ } | S(   Ng      n@g      ^@i   (   R»   (   RD   R)   Rs   (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRk   f  s    (   R�   R‘   RS   Rk   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyRa   `  s   	c         C   s  |  d k r |  d 8}  n  |  d }  | d 9} t  |  ƒ } |  | } | d | } | d | | } | d | d | } | d k r’ | | | f S| d k r« | | | f S| d k rÄ | | | f S| d k rÝ | | | f S| d k rö | | | f S| | | f Sd  S(	   Nih  i<   iÿ   i   i    i   i   i   (   R   (   RU   t   st   vRN   t   ft   pt   qt   t(    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyR»   j  s(    


     (#   t
   __future__R    R5   t   mmtbxR   R   t   mathR   R   R   R   R   R   t   dictt   zipR   t   key_captionsR’   R�   R   R/   R*   R0   t   objectR1   R?   R@   R]   R^   Rb   Rc   Rd   R`   Ra   R»   (    (    (    sB   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/polygon/output.pyt   <module>   s.   .

		
…E!

