ó
šxTc           @   sË   d  d l  m Z d  d l m Z d e f d     YZ d e f d     YZ d e f d     YZ d	 e e f d
     YZ d e e f d     YZ	 d   Z
 d   Z e d  Z d   Z e d  Z d S(   i˙˙˙˙(   t   division(   t   simple_matplotlib_plott   rotarama_plot_mixinc           B   sA   e  Z d  d d  d g Z d   Z d e d d d d d d  Z RS(   i    ih  c         C   s\   t  |  d  s t  g  |  _ g  |  _ |  j j d  |  _ |  j j d d d d g  d  S(   Nt   figureio   gš?g333333ë?(   t   hasattrt   AssertionErrort   _pointst   _xyzR   t   add_subplott   plott   set_position(   t   self(    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   __init__   s
    		t   jetc
      	   C   s"  d d  l  }
 g  |  _ g  |  _ t |
 j |  } |  j j   | d  k rU |  j } n t	 |  d k sm t
  | GH|  j j | d d d | d | | d  k	 rČ |  j j | | d d d d d | n  |	 d  k rá |  j   n |  j d	 |	  |  j j |  | d  k	 r| d  k	 r:t	 |  t	 |  k s:t
  n  xÔ t |  D]Ă \ } \ } } } } | rč|  j j | f | f d
 d d | rŹ|  j j | | | d d n  |  j j | | f  | d  k	 r
|  j j | |  q
qG|  j j | f | f d
 d d qGWn  |  j j   d  S(   Ni˙˙˙˙i   t   origint   lowert   cmapt   extentt   colorst   kt   y_markst   bot   markerfacecolort   redt   colort   blackt   white(   t   matplotlib.cmR   R   t   getattrt   cmR	   t   cleart   NoneR   t   lenR   t   imshowt   contourt
   set_labelst	   set_titlet	   enumeratet   textt   appendt   canvast   draw(   R   t   statst   titlet   pointst   show_labelst   colormapt   contourst   xyzR   R   t
   matplotlibR   t   it   xt   yt   labelt
   is_outlier(    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt	   draw_plot   s@    
		"
 !%")N(   t   __name__t
   __module__R   R   R   t   TrueR7   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR      s   	
t   ramachandran_plot_mixinc           B   s&   e  Z d  d d  d g Z d d  Z RS(   iM˙˙˙ił   c         C   se   |  j  j   } | j d  | j d d d d d g  | j d  | j d d d d d g  d  S(   Nt   Phii˙˙˙iÄ˙˙˙i    i<   ix   t   Psi(   R	   t   get_axest
   set_xlabelt
   set_xtickst
   set_ylabelt
   set_yticks(   R   R   t   axes(    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR#   =   s
    (    (   R8   R9   R   R#   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR;   ;   s   t   rotamer_plot_mixinc           B   s   e  Z d d  Z RS(   i<   i´   i,  c         C   si   |  j  j   } | j d  | j d d d g  | j d  | j t |   | j t d d d  S(   Nt   Chi1i<   i´   i,  t   Chi2R   s   0.75(	   R	   R>   R?   R@   RA   RB   t   listt   gridR:   (   R   R   RC   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR#   E   s    (   i<   i´   i,  (   R8   R9   R#   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyRD   D   s   t   ramachandran_plotc           B   s   e  Z d    Z RS(   c         O   s*   t  j |  | |  t j |  | |  d  S(   N(   R   R   R;   (   R   t   argst   kwds(    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR   N   s    (   R8   R9   R   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyRI   M   s   t   rotamer_plotc           B   s   e  Z d    Z RS(   c         O   s*   t  j |  | |  t j |  | |  d  S(   N(   R   R   RD   (   R   RJ   RK   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyR   S   s    (   R8   R9   R   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyRL   R   s   c      
   C   sť  | d k r t  d |   n  g  g  } } xt |   D]t\ } } | \	 } }	 }
 } } } } } } | d k r| d	 k s |
 j   | j   k r­|
 d k r­| d k sŢ | d k rĆ | d k sŢ | d k r| d k r| j | | d | |	 f | d k f  | j |  qq­q9 | j   | j   k r9 | d k sq| d k rY| d k sq| d k r­| d k r­| j | | d | |	 f | d k f  | j |  q­q9 q9 W| | f S(   Nt   Generalt   Glys   cis-Pros	   trans-Pros   pre-Pros   Ile/Vals/   Ramachandran position type '%s' not recognized.t   generalt   *t   PROt   GLYt   ILEt   VALt   Alls   Allowed/Outliert   Allowedt   OUTLIERt   Outliers   %s%s(   RM   RN   s   cis-Pros	   trans-Pros   pre-Pros   Ile/Val(   RQ   RR   RS   RT   (   RV   RW   (   RV   RW   (   t
   ValueErrorR%   t   upperR'   (   t   ramalyze_datat   position_typet   residue_namet
   point_typeR,   t   coordsR2   t   residuet   chain_idt   resseqt   resnamet   qualityt   phit   psit   statust   pos_nameR0   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   get_residue_ramachandran_dataW   s2    	!$c         C   sŞ   d } |  d k r | d 7} n |  d k r8 | d 7} nn |  d k rQ | d 7} nU |  d k rj | d	 7} n< |  d
 k r | d 7} n# | d k r | d 7} n
 | | 7} | S(   Ns   Ramachandran plot for s   cis-prolines   cis-Prolines   trans-prolines   trans-Prolinet   glycinet   Glycines   pre-prolines   pre-Proline residuess   isoleucine or valines
   Ile or ValRP   s   all non-Pro/Gly residues(    (   R\   t   residue_typeR+   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   format_ramachandran_plot_titlew   s    
c   
      C   sĽ   t  d |  d | d d d d  \ } } t   } t | d  } | d k rZ d d	 g }	 n d
 d	 g }	 | j d | d | d | d | d d d |	  | j |  d  S(   NR[   R\   R]   RP   R^   RU   RO   gA`ĺĐ"Ă?gŞńŇMbŘ?gßOnË?R*   R+   R,   R0   R.   t   BluesR/   (   Ri   RI   Rm   R7   t
   save_image(
   R[   t   rotarama_dataR\   t	   file_nameR-   R,   R_   t   pR+   R/   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   draw_ramachandran_plot   s$    		c         C   sĐ   g  g  } } xś t  |   D]¨ \ } } | \
 } } }	 }
 } } } } } } |	 j   | j   k r | d k s | d k rÂ | d k rÂ | j | | d | | f | d k f  | j |  qÂ q q W| | f S(   NRU   RX   RW   s   %s%s(   R%   RZ   R'   (   t   rotalyze_dataR]   R^   R,   R_   R2   R`   Ra   Rb   Rc   Rd   t   chi1t   chi2t   chi3t   chi4Rg   R0   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   get_residue_rotamer_data¤   s    $c   	      C   ss   t  d |  d | d d  \ } } t   } d | } | j d | d | d | d	 | d
 d d d   | j |  d  S(   NRt   R]   R^   RU   s   Chi1-Chi2 plot for %sR*   R+   R,   R0   R.   Rn   R/   (   Ry   RL   R7   R   Ro   (	   Rt   Rp   R]   Rq   R-   R,   R_   Rr   R+   (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   draw_rotamer_plot˛   s    	
	N(   t
   __future__R    t   iotbx.data_plotsR   t   objectR   R;   RD   RI   RL   Ri   Rm   R:   Rs   Ry   Rz   (    (    (    sD   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/mmtbx/rotamer/graphics.pyt   <module>   s   6			 		