xTc@ spddlmZddlmZddlZddlZdZdZe dkrleedGHndS(i(tdivision(t data_plotsNcC sd}tjd}|j|t|jdks=t|jddddddgkset|jd ddkst|j|kst|j|jd d d d dgkst|j dkstt dd}|j d|j ||j d|j ||j tj d}t|dksZt|dj|ksvt|dj|djksttjdddddddgdddgd ddgdd ggd!dddddgd"d#d$d%d&gd'd(d)d*d+gd,d-d.d/dgg}|j|ksJt|jd}|jd}t|jdkrt|jdkst|jd0d}|jd0d}t|dkrt|dkst|j\} } t| d1kst|j\} } t| dks:td2} |jd3d| ks^td4} d5} |jd3d}|| kst|t|| kst|j}|d6kstdS(7NsY$TABLE: Resolution shell statistics $GRAPHS :R-free vs. resolution :A:1,3: :FOM vs. resolution :A:1,4: $$ 1/resol^2 Nrefl R-free FOM $$ $$ 0.02 2004 0.25 0.89 0.04 2084 0.23 0.88 0.06 2037 0.27 0.83 0.08 1949 0.28 0.75 0.1 1783 0.38 * $$ iig{Gz?g{Gz?gQ?g{Gz?g?iis0.1t1783s0.38t*s{"rows": [["1/resol^2", "Nrefl", "R-free", "FOM"], ["0.02", "2004", "0.25", "0.89"], ["0.04", "2084", "0.23", "0.88"], ["0.06", "2037", "0.27", "0.83"], ["0.08", "1949", "0.28", "0.75"], ["0.1", "1783", "0.38", "*"]], "title": "Resolution shell statistics"}s_tst_data_plots.logtws Random non-loggraph text s iittitlesResolution shell statisticst column_labelss 1/resol^2tNreflsR-freetFOMt graph_namessR-free vs. resolutionsFOM vs. resolutiont graph_columnstdataii$iiig?gq= ףp?gHzG?gQ?gRQ?g{Gz?g)\(?g(\?g?tfill_in_missing_yis< ------------------------------------------------- | Resolution shell statistics | |-----------------------------------------------| | 1/resol^2 | Nrefl | R-free | FOM | |-----------------------------------------------| | 0.02 | 2004 | 0.25 | 0.89 | | 0.04 | 2084 | 0.23 | 0.88 | | 0.06 | 2037 | 0.27 | 0.83 | | 0.08 | 1949 | 0.28 | 0.75 | | 0.1 | 1783 | 0.38 | * | ------------------------------------------------- tindents Resolution shell statistics 1/resol^2 Nrefl R-free FOM 0.02 2004 0.25 0.89 0.04 2084 0.23 0.88 0.06 2037 0.27 0.83 0.08 1949 0.28 0.75 0.1 1783 0.38 * sResolution shell statistics 1/resol^2 Nrefl R-free FOM 0.02 2004 0.25 0.89 0.04 2084 0.23 0.88 0.06 2037 0.27 0.83 0.08 1949 0.28 0.75 0.1 1783 0.38 * s{"graph_types": ["A", "A"], "graph_columns": [[0, 2], [0, 3]], "title": "Resolution shell statistics", "column_labels": ["1/resol^2", "Nrefl", "R-free", "FOM"], "data": [[0.02, 0.04, 0.06, 0.08, 0.1], [2004, 2084, 2037, 1949, 1783], [0.25, 0.23, 0.27, 0.28, 0.38], [0.89, 0.88, 0.83, 0.75, null]], "graph_names": ["R-free vs. resolution", "FOM vs. resolution"], "x_is_inverse_d_min": false}(Rt table_datatNonetimport_loggraphtlenR tAssertionErrortformat_loggrapht export_rowstexport_json_tabletopentwritetclosetimport_ccp4i_logfilet get_grapht get_plotstpoptformatt format_simpletstrt export_json(t loggraph1tttfttablestt2tg1tg2tp1tp2tplot_xtplot_ytformatted_tablet simple_tablet simpler_tablet formattedtjson_str((sM/public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/iotbx/regression/tst_data_plots.pytexercise_inlines` ($(     &  0*    c C stjjdddtjj}|dk rtj|}g|D]}|j ^qCdddddd d d d d g kst nd}tj d}|j ||j d}|j}dS(Nt relative_paths$phenix_regression/tracking/scala.logttests)>>> Scales v rotation range, Unspecified s$Analysis against Batch, Unspecified s*Analysis against resolution , Unspecified s(Analysis against intensity, Unspecified s=Completeness, multiplicity, Rmeas v. resolution, Unspecified s)Correlations within dataset, Unspecified s'Axial reflections, axis h, Unspecified s'Axial reflections, axis k, Unspecified s'Axial reflections, axis l, Unspecified s8Run 1, standard deviation v. Intensity, Unspecified s$TABLE: Matthews coefficients: $GRAPHS: Protein crystal computed at resolution of 2.450 :A:1,2,3,4 $$ Nmol/asym Matthews_Coeff sovlent_frac P(2.450) $$ $$ 1 3.13 0.61 0.99 2 1.56 0.21 0.01 $$ s/Protein crystal computed at resolution of 2.450(tlibtbxtenvtfind_in_repositoriestostpathtisfileRRRRRRRRR(tlog_fileR$R"t loggraph3tt3tg3tp3((sM/public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/iotbx/regression/tst_data_plots.pytexercise_logfilens*    t__main__tOK( t __future__RtiotbxRtlibtbx.load_envR4R7R1R?t__name__(((sM/public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/iotbx/regression/tst_data_plots.pyts   g