ó
‚™xTc           @   s‡   d  d l  m Z d  d l Z d  d l m Z d  d l Z d  d l Z d  d l m Z d d „ Z	 e
 d k rƒ e	 d e j d	 ƒ n  d S(
   iÿÿÿÿ(   t   divisionN(   t   option_parser(   t   mtzs   phenix.cns_as_mtzc      	   C   sÚ  t  |  ƒ d k r d g }  n  t d d | d d | ƒ j ƒ  j d d d	 d
 d t d d ƒj d |  ƒ } t  | j ƒ d k r‘ | j j ƒ  d  S| j d } | j	 } | j
 ƒ  d  k rè Hd d GHd GHd GHd d GHH| j j ƒ  d  S| j ƒ  d  k r)Hd d GHd GHd GHd d GHH| j j ƒ  d  S| j j sVd G| GHd GH| j d d ƒ n  t j j j d t | d ƒ ƒ } | j j s�| j ƒ  n  | j d | ƒ } d  } x_ | D]W } | d  k rã| j d | j ƒ  j d ƒ } q¯| j d | d | j ƒ  j d ƒ q¯W| j ƒ  }	 xV |	 j ƒ  D]H }
 i d d  6d! d" 6j |
 j ƒ  ƒ } | d  k	 r#|
 j d# | ƒ q#q#W|	 j ƒ  t j  j! | ƒ } | j" d$ ƒ d k r¶| | j# d$ ƒ  } n  | d% 7} d& G| GH|	 j$ | ƒ d  S('   Ni    s   --helpt   usages   %s [options] cns_filet   descriptions   Example: %s scale.hkls   -qs   --quiett   actiont
   store_truet   defaultt   helps   suppress outputt   argsi   t   *iO   s   Unknown unit cell parameters.s2   Use --symmetry or --unit_cell to define unit cell:s   Unknown space group.s6   Use --symmetry or --space_group to define space group:s   CNS file name:s   Crystal symmetry:t   prefixs     t   file_handlet   rt   crystal_symmetryt   column_root_labelt   miller_arrayt   Wt   FOMt   Pt   PHASEt   new_typet   .s   .mtzs   Writing MTZ file:(%   t   lenR   t   enable_symmetry_comprehensivet   optiont   Falset   processR	   t   parsert	   show_helpt   symmetryt	   unit_cellt   Nonet   space_group_infot   optionst   quiett   show_summaryt   iotbxt   cnst   reflection_readert   cns_reflection_filet   opent   as_miller_arrayst   as_mtz_datasett   infot   labelst   add_miller_arrayt
   mtz_objectt   columnst   gett   labelt   set_typet   ost   patht   basenamet   countt   indext   write(   R	   t   command_namet   command_linet   cns_file_nameR   t   reflection_filet   miller_arrayst   mtz_datasetR   R/   t   columnt   column_typet   mtz_file_name(    (    sK   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/iotbx/command_line/cns_as_mtz.pyt   run	   s‚     
												

	t   __main__R	   i   (   t
   __future__R    t   iotbx.cns.reflection_readerR%   t   iotbx.option_parserR   t   sysR4   R   RC   t   __name__t   argv(    (    (    sK   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/iotbx/command_line/cns_as_mtz.pyt   <module>   s   D