ó
4™xTc           @   s²   d  d l  m Z d  d l m Z d  d l m Z d  d l Z d  d l m Z d  d l	 m
 Z
 d  d l Z d  d l Z d  d l Z d d d	 „ Z d
 „  Z e d k r® e ƒ  n  d S(   iÿÿÿÿ(   t   division(   t   itvc_section61_io(   t	   kissel_ioN(   t   flex(   t   OptionParsert   itvc_kissel_plotsi    c          C   só  t  j |  d ƒ } t j j j } | | d k } | rK | | d k M} n  | j | ƒ } x’|  d D]†} t j | ƒ }	 |	 j	 d k r� qe n  |	 j
 | d k }
 |	 j
 j |
 ƒ } |	 j j |
 ƒ } |	 j j |
 ƒ } | j |	 j	 } | j j | ƒ } | j j | ƒ } t t j j | |	 j	 d ƒ d ƒ } t j j j | | | ƒ t j j j | | | ƒ | j ƒ  t j |	 j
 |	 j | ƒ } t j |	 j
 |	 j | ƒ } | j d ƒ s¸t ‚ t j ƒ  } | d IJd } d } xÝ t | | | | | ƒ D]Ã \ } } } } } | d k r+d	 t | | ƒ } n d
 } | | } t | ƒ | } t d t | ƒ | | ƒ | } | d | | | | | | | | f IJt | t | ƒ ƒ } t | | ƒ } qóWd G|	 j	 Gd | | f GHt j j  | j! ƒ  ƒ Hqe Wd  S(   Ni    g�íµ ÷Æ°>i   i   t   Ess   .xyt   ws=   stol  kissel    itvc   delta sig_itvc rel_sig rel_del tol_dels   %7.4fs    ******s-   %4.2f %7.4f %7.4f %7.4f %8.5f %-s %7.4f %7.4fs   Element:s    max_delta=%.4f, max_tol_del=%.4fg½7†   @("   R   t   read_table6111t   cctbxt   eltbxt   gaussian_fitt   international_tables_stolst   selectR   t
   read_tablet   elementt   xt   yt   sigmast   entriest   table_yt   table_sigmast   opent   ost   patht   joint
   write_plott   closeR   t   linear_interpolationt   all_gtt   AssertionErrort   StringIOt   zipt   abst   maxt   syst   stdoutt   writet   getvalue(    t   argst   cutofft   high_resolution_onlyt	   plots_dirt   verboset   itabt   itab_xt   iselt	   file_namet   ktabt   selt   ktab_xt   ktab_yt   ktabs_sigmast
   itab_entryt   itab_yt   itab_sigmast   ft   ktab_y_it   ktab_sigmas_it   st	   max_deltat   max_tol_delR   t   kyt   ksigt   iyt   isigt   iet   deltat   rel_delt   tol_del(    (    sQ   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/eltbx/development/itvc_kissel.pyt   run
   sX     %

 
!c          C   s®   t  d d ƒ }  |  j d d d d d d d	 d
 d d ƒ|  j d d d d d d d d ƒ|  j ƒ  \ } } t | ƒ d k  r‹ |  j ƒ  d  St d | d | j d | j ƒ d  S(   Nt   usages9   usage: python %prog [options] itvc_table kissel_files ...s   -cs   --cutofft   typet   floatt   defaulti   t   metavart   FLOATt   helps   maximum sin(theta)/lambdas   -gs   --high_resolution_onlyt   actiont
   store_truei    s1   analyze points beyond sin(theta)/lambda=2A-1 onlyi   R'   R(   R)   (   R   t
   add_optiont
   parse_argst   lent
   print_helpRF   R(   R)   (   t   parsert   optionsR'   (    (    sQ   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/eltbx/development/itvc_kissel.pyt   main7   s     	
	t   __main__(   t
   __future__R    t   cctbx.eltbx.developmentR   R   t   cctbx.eltbx.gaussian_fitR	   t   cctbx.array_familyR   t   libtbx.option_parserR   t	   cStringIOR   R#   R   RF   RV   t   __name__(    (    (    sQ   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/eltbx/development/itvc_kissel.pyt   <module>   s   ,	