ó
N™xTc           @   sZ   d  d l  m Z d  d l m Z d  d l m Z d  d l m Z d e f d „  ƒ  YZ d S(   iÿÿÿÿ(   t   division(   t   sgtbx(   t   cosets(   t   lattice_symmetryt   reindexing_operatorsc           B   s2   e  Z d  d d e d d „ Z d „  Z d „  Z RS(   gš™™™™™©?i
   g      @c         C   s;  | j  ƒ  |  _ | j  ƒ  |  _ | j |  j ƒ } | j |  j ƒ }	 t j | j ƒ  | ƒ }
 t j |	 j ƒ  | ƒ } | j | ƒ j ƒ  } |	 j | ƒ j ƒ  } | j ƒ  j	 d |	 j ƒ  d | d | ƒ } d  } d  |  _ x� | D]‡ } t j t j | ƒ ƒ } t j | ƒ j ƒ  } | j ƒ  j d |	 j ƒ  j d | ƒ ƒ } | d  k sQ| | k rÜ | } | |  _ qÜ qÜ Wd  |  _ |  j d  k	 r7|
 } xK | j ƒ  j |  j ƒ D]1 } y | j | ƒ Wqžt k
 rÎd  } qžXqžW| d  k	 r7| j ƒ  | j ƒ  j ƒ  } | j ƒ  j |  j ƒ j ƒ  } t j | | | ƒ |  _ q7n  d  S(   Nt   othert   relative_length_tolerancet   absolute_angle_tolerancet   cb_op(   t!   change_of_basis_op_to_niggli_cellt   cb_op_to_n_1t   cb_op_to_n_2t   change_basisR   t   groupt	   unit_cellt   reflection_intensity_symmetryt   space_groupt   similarity_transformationst   Nonet   similarity_cb_opR   t   rt_mxt   rot_mxt   change_of_basis_opt   inverset   bases_mean_square_differencet   double_cosetst   build_derived_acentric_groupt
   expand_smxt   RunTimeErrort	   make_tidyR   (   t   selft   xs1t   xs2R   R   t	   max_deltat   anomalous_flagt   outt   nxs1t   nxs2t	   lat_sym_1t	   lat_sym_2t	   int_sym_1t	   int_sym_2t   c_inv_rst   min_bases_msdt   c_inv_rt   c_invR   t	   bases_msdt   common_lattice_groupt   st   h1t   h2(    (    sC   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/crystal/reindex.pyt   __init__   sN    				 
	c         C   sT   g  } |  j  d  k	 rP x8 |  j  j  D]' } | j t j | d ƒ |  j ƒ q" Wn  | S(   Ni    (   R   R   t   appendR   R   R   (   R   t   resultt   coset(    (    sC   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/crystal/reindex.pyt   cb_ops_in_niggli_settingI   s
    (c         C   sa   g  } |  j  d  k	 r] xE |  j  j  D]4 } t j | |  j |  j |  j ƒ } | j | ƒ q" Wn  | S(   N(   R   R   R   t   construct_nice_cb_opR   R
   R   R4   (   R   t   resultsR6   t   r(    (    sC   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/crystal/reindex.pyt   combined_cb_opsP   s    	N(   t   __name__t
   __module__t   TrueR   R3   R7   R;   (    (    (    sC   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/crystal/reindex.pyR      s   :	N(	   t
   __future__R    t   cctbxR   t   cctbx.sgtbxR   R   t   objectR   (    (    (    sC   /public2/ftp/pub/ccp4/6.5/ccp4-6.5/lib/py2/cctbx/crystal/reindex.pyt   <module>   s   