#!/bin/csh -f
#
protin 				\
XYZIN {$YPDB}mucolipase_final.pdb	\
DICTPROTN {$SCRATCH}testdict.dat		\
PROTOUT {$SCRATCH}protout.dat		\
PROTCOUNTS {$SCRATCH}counts.dat		\
<< 'END-protin ' | col -b
TITLE REFINE TAKAXP_MODEL7_9.PDB
CHNNAM ID A CHNTYP 1
CHNNAM ID C CHNTYP 2
CHNTYP 1 NTERM 1 ALA 3 CTERM 269 THR 2
CHNTYP 1 DISUL 3   29 268   40 43   235 244
CHNTYP 2 WAT 
PEPP 4 
SYMM 19
VDWRadii 1 CA 7 3.8
VDWCUT 5
CONTACTS 
END
'END-protin '